Aliases : YCF3, Ceric.02G013500
Description : protein involved in PS-I assembly *(YCF3) & original description: pacid=50583878 polypeptide=Ceric.02G013500.1.p locus=Ceric.02G013500 ID=Ceric.02G013500.1.v2.1 annot-version=v2.1
Gene families : OG0006366 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006366_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ceric.02G013500.1 | |
| Cluster | HCCA: Cluster_45 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| ATCG00360 | YCF3 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g34996 | YCF3 | protein involved in PS-I assembly *(YCF3) & original... | 0.12 | OrthoFinder output from all 47 species | |
| Als_g33718 | YCF3 | protein involved in PS-I assembly *(YCF3) & original... | 0.06 | OrthoFinder output from all 47 species | |
| Cba_g70304 | YCF3 | protein involved in PS-I assembly *(YCF3) & original... | 0.12 | OrthoFinder output from all 47 species | |
| Ceric.1Z022600.1 | YCF3, Ceric.1Z022600 | protein involved in PS-I assembly *(YCF3) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.1Z161500.1 | YCF3, Ceric.1Z161500 | not classified & original description: pacid=50596948... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.26G038300.1 | YCF3, Ceric.26G038300 | not classified & original description: pacid=50599550... | 0.07 | OrthoFinder output from all 47 species | |
| Ceric.29G032800.1 | YCF3, Ceric.29G032800 | protein involved in PS-I assembly *(YCF3) & original... | 0.12 | OrthoFinder output from all 47 species | |
| Ceric.31G008800.1 | Ceric.31G008800 | not classified & original description: pacid=50574640... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01016018001 | No alias | Photosystem I assembly protein Ycf3 OS=Nicotiana tabacum | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g57966.1 | YCF3, LOC_Os01g57966 | YCF3 protein involved in PS-I assembly | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os04g16736.1 | YCF3, LOC_Os04g16736 | YCF3 protein involved in PS-I assembly | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os04g16762.1 | YCF3, LOC_Os04g16762 | YCF3 protein involved in PS-I assembly | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os10g21254.1 | YCF3, LOC_Os10g21254 | YCF3 protein involved in PS-I assembly | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os10g38216.1 | YCF3, LOC_Os10g38216 | YCF3 protein involved in PS-I assembly | 0.07 | OrthoFinder output from all 47 species | |
| Lfl_g14015 | YCF3 | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Lfl_g19607 | YCF3 | protein involved in PS-I assembly *(YCF3) & original... | 0.11 | OrthoFinder output from all 47 species | |
| Mp3g09610.1 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g08805 | YCF3 | protein involved in PS-I assembly *(YCF3) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g21679 | No alias | protein involved in PS-I assembly *(YCF3) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc00g500058.1.1 | YCF3, Solyc00g500058 | YCF3 protein involved in PS-I assembly | 0.06 | OrthoFinder output from all 47 species | |
| Solyc00g500059.1.1 | Solyc00g500059 | Photosystem I assembly protein Ycf3 OS=Solanum... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc00g500144.1.1 | Solyc00g500144 | Photosystem I assembly protein Ycf3 OS=Solanum... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc00g500210.1.1 | YCF3, Solyc00g500210 | YCF3 protein involved in PS-I assembly | 0.06 | OrthoFinder output from all 47 species | |
| Solyc00g500211.1.1 | Solyc00g500211 | Photosystem I assembly protein Ycf3 OS=Solanum... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc09g015280.1.1 | YCF3, Solyc09g015280 | Photosystem I assembly protein Ycf3 OS=Solanum... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g015320.3.1 | PSAA, Solyc09g015320 | Photosystem I P700 chlorophyll a apoprotein A1... | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
