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  5. Ceric.02G081600.1

Ceric.02G081600.1 (Ceric.02G081600)


Aliases : Ceric.02G081600

Description : regulatory factor *(TZF) of mRNA stress granule formation & original description: pacid=50584271 polypeptide=Ceric.02G081600.1.p locus=Ceric.02G081600 ID=Ceric.02G081600.1.v2.1 annot-version=v2.1


Gene families : OG0000156 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000156_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.02G081600.1
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AT2G19810 No alias CCCH-type zinc finger family protein 0.02 OrthoFinder output from all 47 species
Adi_g124625 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Ala_g17274 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Als_g01096 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Aop_g14316 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Aspi01Gene15677.t1 Aspi01Gene15677 regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
Aspi01Gene68944.t1 Aspi01Gene68944 regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Cba_g04032 No alias regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
Cba_g05838 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
Cba_g24660 No alias regulatory factor *(TZF) of mRNA stress granule... 0.01 OrthoFinder output from all 47 species
Ceric.17G068000.1 ATTZF1, ATCTH,... regulatory factor *(TZF) of mRNA stress granule... 0.01 OrthoFinder output from all 47 species
Dac_g15516 No alias regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
Dcu_g07562 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Ehy_g08338 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
LOC_Os01g09620.1 LOC_Os01g09620 mRNA-binding regulatory factor (TZF) 0.01 OrthoFinder output from all 47 species
LOC_Os12g33090.1 LOC_Os12g33090 mRNA-binding regulatory factor (TZF) 0.01 OrthoFinder output from all 47 species
Msp_g13456 No alias regulatory factor *(TZF) of mRNA stress granule... 0.05 OrthoFinder output from all 47 species
Nbi_g02332 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Nbi_g17185 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Pnu_g20981 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.05 OrthoFinder output from all 47 species
Pnu_g30312 No alias regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
Pp3c16_20450V3.1 Pp3c16_20450 No annotation 0.01 OrthoFinder output from all 47 species
Ppi_g33576 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005148 No alias regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
Sam_g49873 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Solyc01g087170.3.1 Solyc01g087170 mRNA-binding regulatory factor (TZF) 0.02 OrthoFinder output from all 47 species
Solyc03g063680.3.1 Solyc03g063680 mRNA-binding regulatory factor (TZF) 0.07 OrthoFinder output from all 47 species
Tin_g02786 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Tin_g28355 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 344 364
IPR002110 Ankyrin_rpt 81 161
No external refs found!