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  5. Ceric.02G100600.1

Ceric.02G100600.1 (MSL6, Ceric.02G100600)


Aliases : MSL6, Ceric.02G100600

Description : mechanosensitive ion channel *(MSL) & original description: pacid=50583830 polypeptide=Ceric.02G100600.1.p locus=Ceric.02G100600 ID=Ceric.02G100600.1.v2.1 annot-version=v2.1


Gene families : OG0000689 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000689_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.02G100600.1
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00171160 MSL6,... Solute transport.channels.MSL mechanosensitive ion channel 0.03 OrthoFinder output from all 47 species
AT5G12080 MSL10, ATMSL10 mechanosensitive channel of small conductance-like 10 0.03 OrthoFinder output from all 47 species
Adi_g055202 MSL6 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01071 MSL4 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09653 No alias mechanosensitive ion channel *(MSL) & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0005.g009367 MSL6 mechanosensitive ion channel *(MSL) & original... 0.05 OrthoFinder output from all 47 species
Cba_g03379 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g12993 MSL6 mechanosensitive ion channel *(MSL) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g10976 MSL4 mechanosensitive ion channel *(MSL) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g11793 MSL6 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01015113001 MSL10, ATMSL10 Solute transport.channels.MSL mechanosensitive ion channel 0.03 OrthoFinder output from all 47 species
GSVIVT01023959001 MSL4 Solute transport.channels.MSL mechanosensitive ion channel 0.03 OrthoFinder output from all 47 species
GSVIVT01035448001 MSL10, ATMSL10 Solute transport.channels.MSL mechanosensitive ion channel 0.03 OrthoFinder output from all 47 species
Lfl_g28112 MSL6 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10428116g0010 MSL10, ATMSL10 mechanosensitive ion channel (MSL) 0.02 OrthoFinder output from all 47 species
Msp_g15988 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29070 ATHSP70, HSP70 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38008 MSL6 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g28577 MSL4 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015319 MSL5 mechanosensitive ion channel *(MSL) & original... 0.05 OrthoFinder output from all 47 species
Sam_g47206 No alias mechanosensitive ion channel *(MSL) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc08g061980.4.1 MSL10, ATMSL10,... mechanosensitive ion channel (MSL) 0.07 OrthoFinder output from all 47 species
Spa_g10135 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g11582 MSL4 mechanosensitive ion channel *(MSL) & original description: none 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR006685 MscS_channel 598 801
No external refs found!