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  5. Ceric.03G048600.1

Ceric.03G048600.1 (NFD2, HMG BETA 1,...)


Aliases : NFD2, HMG BETA 1, HMGB2, NFD02, Ceric.03G048600

Description : not classified & original description: pacid=50572457 polypeptide=Ceric.03G048600.1.p locus=Ceric.03G048600 ID=Ceric.03G048600.1.v2.1 annot-version=v2.1


Gene families : OG0000118 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000118_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.03G048600.1

Target Alias Description ECC score Gene Family Method Actions
Als_g31169 NFD2, HMG BETA... DNA bending architectural protein *(HMG-B) & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000655.17 No alias No description available 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000984.29 No alias No description available 0.01 OrthoFinder output from all 47 species
Len_g06895 NFD2, HMG BETA... DNA bending architectural protein *(HMG-B) & original... 0.04 OrthoFinder output from all 47 species
Tin_g39649 NFD2, HMG BETA... DNA bending architectural protein *(HMG-B) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR029188 Rrp14_N 3 55
IPR009071 HMG_box_dom 58 97
No external refs found!