Ceric.03G072800.1 (AtRABG3d, RABG3d,...)

Aliases : AtRABG3d, RABG3d, Ceric.03G072800

Description : G-class RAB GTPase & original description: pacid=50571886 polypeptide=Ceric.03G072800.1.p locus=Ceric.03G072800 ID=Ceric.03G072800.1.v2.1 annot-version=v2.1

Gene families : OG0000865 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000865_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.03G072800.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00109p00039990	AtRABG3d,...	Vesicle trafficking.regulation of membrane tethering and...	0.03	OrthoFinder output from all 47 species
Adi_g021271	AtRABG3d, RABG3d	G-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g47846	AtRABG3d, RABG3d	G-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g18575	AtRABG3d, RABG3d	G-class RAB GTPase & original description: none	0.05	OrthoFinder output from all 47 species
Solyc04g051680.4.1	ATRABG3B,...	G-class RAB GTPase	0.04	OrthoFinder output from all 47 species
Solyc04g072060.4.1	ATRABG3A,...	G-class RAB GTPase	0.07	OrthoFinder output from all 47 species
Spa_g12567	ATRABG3C, ATRAB7D, RABG3c	G-class RAB GTPase & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005739	mitochondrion	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0051287	NAD binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	10	176

External Links

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Ceric.03G072800.1 (AtRABG3d, RABG3d,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation