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  5. Ceric.03G086000.1

Ceric.03G086000.1 (TUB2, Ceric.03G086000)


Aliases : TUB2, Ceric.03G086000

Description : beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer & original description: pacid=50572376 polypeptide=Ceric.03G086000.1.p locus=Ceric.03G086000 ID=Ceric.03G086000.1.v2.1 annot-version=v2.1


Gene families : OG0000152 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000152_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.03G086000.1
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00251790 TUB8,... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
AMTR_s00029p00190040 TUB8,... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.1 OrthoFinder output from all 47 species
AMTR_s00101p00135960 TUB6 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
AT2G29550 TUB7 tubulin beta-7 chain 0.04 OrthoFinder output from all 47 species
AT5G12250 TUB6 beta-6 tubulin 0.04 OrthoFinder output from all 47 species
AT5G62700 TUB3 tubulin beta chain 3 0.03 OrthoFinder output from all 47 species
Adi_g028533 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.06 OrthoFinder output from all 47 species
Adi_g055550 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Adi_g068860 TUB7 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g103981 TUB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g105533 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.08 OrthoFinder output from all 47 species
Ala_g16994 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Ala_g23454 TUB6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g23768 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.1 OrthoFinder output from all 47 species
Ala_g31167 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.07 OrthoFinder output from all 47 species
Als_g10858 TUB8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19148 TUB7 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.17 OrthoFinder output from all 47 species
Als_g54930 TUB7 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.17 OrthoFinder output from all 47 species
Aob_g08895 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Aop_g11143 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Aop_g33014 TUB7 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.13 OrthoFinder output from all 47 species
Aop_g64603 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Aspi01Gene10198.t1 TUB2, Aspi01Gene10198 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.07 OrthoFinder output from all 47 species
Aspi01Gene35906.t1 TUB2, Aspi01Gene35906 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.07 OrthoFinder output from all 47 species
Azfi_s0155.g053637 TUB6 not classified & original description: CDS=179-1075 0.02 OrthoFinder output from all 47 species
Cba_g06846 TUB8 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.07G056800.1 TUB6, Ceric.07G056800 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001067.14 TUB2 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001067.6 TUB2 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Dac_g23831 TUB7 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.09 OrthoFinder output from all 47 species
Dac_g34924 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Dac_g42639 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Dcu_g08335 TUB7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019758001 TUB6 Tubulin beta-4 chain OS=Eleusine indica 0.01 OrthoFinder output from all 47 species
GSVIVT01019775001 TUB8 Tubulin beta-8 chain OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01024825001 TUB8 Tubulin beta-8 chain OS=Arabidopsis thaliana 0.12 OrthoFinder output from all 47 species
GSVIVT01037405001 TUB2 Tubulin beta-4 chain OS=Eleusine indica 0.03 OrthoFinder output from all 47 species
Gb_15855 TUB2 Tubulin beta-3 chain OS=Oryza sativa subsp. japonica... 0.06 OrthoFinder output from all 47 species
Gb_22609 TUB6 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 OrthoFinder output from all 47 species
Gb_25332 TUB2 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.06 OrthoFinder output from all 47 species
LOC_Os03g01530.1 TUB8, LOC_Os03g01530 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.05 OrthoFinder output from all 47 species
Len_g08315 TUB7 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.12 OrthoFinder output from all 47 species
Len_g14303 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Len_g52480 TUB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g05282 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Lfl_g05333 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
MA_10431251g0010 TUB6 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 OrthoFinder output from all 47 species
MA_4935021g0010 TUB6 Tubulin beta-1 chain OS=Zea mays (sp|p18025|tbb1_maize : 189.0) 0.02 OrthoFinder output from all 47 species
MA_79708g0010 TUB6 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species
Mp1g20730.1 TUB6 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 OrthoFinder output from all 47 species
Mp2g09390.1 TUB8 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species
Mp2g16780.1 TUB6 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.06 OrthoFinder output from all 47 species
Msp_g09508 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Msp_g41363 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.08 OrthoFinder output from all 47 species
Msp_g45769 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.06 OrthoFinder output from all 47 species
Nbi_g06645 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.07 OrthoFinder output from all 47 species
Nbi_g06968 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.1 OrthoFinder output from all 47 species
Nbi_g23785 TUB8 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g40498 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Pir_g13770 TUB7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g32238 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Pnu_g23567 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Pp3c2_26580V3.1 TUB6, Pp3c2_26580 tubulin beta chain 2 0.01 OrthoFinder output from all 47 species
Pp3c5_20340V3.1 TUB2, Pp3c5_20340 tubulin beta chain 2 0.01 OrthoFinder output from all 47 species
Ppi_g22152 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.06 OrthoFinder output from all 47 species
Ppi_g27529 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0142.g022789 TUB6 not classified & original description: CDS=157-1053 0.05 OrthoFinder output from all 47 species
Sam_g09510 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.09 OrthoFinder output from all 47 species
Sam_g09511 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.09 OrthoFinder output from all 47 species
Sam_g19878 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Sam_g25916 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.09 OrthoFinder output from all 47 species
Sam_g40899 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Smo408201 TUB8 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Solyc10g085020.3.1 TUB8, Solyc10g085020 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.08 OrthoFinder output from all 47 species
Spa_g20474 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.11 OrthoFinder output from all 47 species
Spa_g24819 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Spa_g47205 TUB7 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.15 OrthoFinder output from all 47 species
Spa_g50619 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.07 OrthoFinder output from all 47 species
Spa_g50620 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.14 OrthoFinder output from all 47 species
Tin_g06951 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Tin_g19305 TUB7 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Tin_g32510 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Tin_g45513 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.14 OrthoFinder output from all 47 species
Zm00001e000048_P003 TUB2, Zm00001e000048 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003896 DNA primase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
CC GO:0031262 Ndc80 complex IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR003008 Tubulin_FtsZ_GTPase 3 211
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 261 382
No external refs found!