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  5. Ceric.03G100100.1

Ceric.03G100100.1 (Ceric.03G100100)


Aliases : Ceric.03G100100

Description : component *(CHL-B) of light-independent protochlorophyllide oxidoreductase complex & original description: pacid=50571526 polypeptide=Ceric.03G100100.1.p locus=Ceric.03G100100 ID=Ceric.03G100100.1.v2.1 annot-version=v2.1


Gene families : OG0008656 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008656_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.03G100100.1
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
Aev_g23246 No alias component *(CHL-B) of light-independent... 0.12 OrthoFinder output from all 47 species
Ala_g08414 No alias component *(CHL-B) of light-independent... 0.05 OrthoFinder output from all 47 species
Als_g12623 No alias component *(CHL-B) of light-independent... 0.07 OrthoFinder output from all 47 species
Aob_g13080 No alias component *(CHL-B) of light-independent... 0.06 OrthoFinder output from all 47 species
Cba_g01188 No alias component *(CHL-B) of light-independent... 0.1 OrthoFinder output from all 47 species
Ceric.01G057200.1 Ceric.01G057200 component *(CHL-B) of light-independent... 0.08 OrthoFinder output from all 47 species
Ceric.01G104800.1 Ceric.01G104800 component *(CHL-B) of light-independent... 0.14 OrthoFinder output from all 47 species
Ceric.1Z116800.1 Ceric.1Z116800 not classified & original description: pacid=50576998... 0.07 OrthoFinder output from all 47 species
Ceric.29G005700.1 Ceric.29G005700 component *(CHL-B) of light-independent... 0.05 OrthoFinder output from all 47 species
Ceric.32G035800.1 Ceric.32G035800 not classified & original description: pacid=50598418... 0.04 OrthoFinder output from all 47 species
Gb_14516 No alias Light-independent protochlorophyllide reductase subunit... 0.03 OrthoFinder output from all 47 species
Gb_27606 No alias component CHL-B of light-independent protochlorophyllide... 0.1 OrthoFinder output from all 47 species
Lfl_g36498 No alias component *(CHL-B) of light-independent... 0.14 OrthoFinder output from all 47 species
Nbi_g02098 No alias component *(CHL-B) of light-independent... 0.07 OrthoFinder output from all 47 species
Sam_g03855 No alias component *(CHL-B) of light-independent... 0.06 OrthoFinder output from all 47 species
Smo137837 No alias Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015979 photosynthesis IEA Interproscan
BP GO:0015995 chlorophyll biosynthetic process IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR013580 LI-POR_suB-like_C 426 470
IPR000510 Nase/OxRdtase_comp1 81 392
No external refs found!