1. Home
  2. Species
  3. Ceratopteris richardii
  4. Sequence
  5. Ceric.04G045700.1

Ceric.04G045700.1 (PAC1, Ceric.04G045700)


Aliases : PAC1, Ceric.04G045700

Description : EC_3.4 hydrolase acting on peptide bond (peptidase) & original description: pacid=50632554 polypeptide=Ceric.04G045700.1.p locus=Ceric.04G045700 ID=Ceric.04G045700.1.v2.1 annot-version=v2.1


Gene families : OG0004222 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004222_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.04G045700.1

Target Alias Description ECC score Gene Family Method Actions
Aev_g03659 PAC1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Ala_g13312 PAC1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Aop_g01048 PAC1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene22432.t1 PAC1, Aspi01Gene22432 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020965.21 PAC1 Protein degradation.26S proteasome.20S core... 0.03 OrthoFinder output from all 47 species
Cre10.g418100 PAC1 Protein degradation.26S proteasome.20S core... 0.04 OrthoFinder output from all 47 species
Dcu_g05251 PAC1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01026133001 PAC1 No description available 0.06 OrthoFinder output from all 47 species
LOC_Os06g07140.1 PAC1, LOC_Os06g07140 component alpha type-3 of 26S proteasome 0.04 OrthoFinder output from all 47 species
Lfl_g21510 PAC1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
MA_474079g0010 PAC1 component alpha type-3 of 26S proteasome 0.04 OrthoFinder output from all 47 species
Mp1g16770.1 PAC1 component alpha type-3 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Nbi_g03431 PAC1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Solyc02g081700.1.1 PAC1, Solyc02g081700 component alpha type-3 of 26S proteasome 0.08 OrthoFinder output from all 47 species
Spa_g55948 PAC1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Tin_g00589 PAC1 EC_3.4 hydrolase acTing on peptide bond (peptidase) &... 0.05 OrthoFinder output from all 47 species
Zm00001e030110_P001 PAC1, Zm00001e030110 component alpha type-3 of 26S proteasome 0.05 OrthoFinder output from all 47 species
Zm00001e036395_P002 PAC1, Zm00001e036395 component alpha type-3 of 26S proteasome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
CC GO:0019773 proteasome core complex, alpha-subunit complex IEA Interproscan
BP GO:0051603 proteolysis involved in protein catabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 30 214
IPR000426 Proteasome_asu_N 5 27
No external refs found!