Ceric.04G059900.1 (TIFY2B, ZML1, GATA24,...)

Aliases : TIFY2B, ZML1, GATA24, Ceric.04G059900

Description : transcription factor *(C-GATA) & original description: pacid=50631305 polypeptide=Ceric.04G059900.1.p locus=Ceric.04G059900 ID=Ceric.04G059900.1.v2.1 annot-version=v2.1

Gene families : OG0001741 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001741_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.04G059900.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00253580	ZML2, GATA28,...	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
Azfi_s0006.g009618	TIFY2B, ZML1, GATA24	transcription factor *(C-GATA) & original description:...	0.04	OrthoFinder output from all 47 species
Dde_g00464	TIFY2B, ZML1, GATA24	transcription factor *(C-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Solyc10g047640.3.1	TIFY2B, ZML1,...	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR010402	CCT_domain	194	236
IPR000679	Znf_GATA	270	306
IPR010399	Tify_dom	128	160

External Links

No external refs found!

Ceric.04G059900.1 (TIFY2B, ZML1, GATA24,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation