Aliases : ARS27A, RS27A, Ceric.05G019300
Description : component *(eS27) of small ribosomal-subunit (SSU) proteome & original description: pacid=50577906 polypeptide=Ceric.05G019300.1.p locus=Ceric.05G019300 ID=Ceric.05G019300.1.v2.1 annot-version=v2.1
Gene families : OG0001813 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001813_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ceric.05G019300.1 | |
| Cluster | HCCA: Cluster_127 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00049p00194290 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.06 | OrthoFinder output from all 47 species | |
| AT3G61110 | ARS27A, RS27A | ribosomal protein S27 | 0.1 | OrthoFinder output from all 47 species | |
| AT5G47930 | No alias | Zinc-binding ribosomal protein family protein | 0.09 | OrthoFinder output from all 47 species | |
| Aev_g42935 | ARS27A, RS27A | component *(eS27) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g24902 | ARS27A, RS27A | component *(eS27) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0004.g008655 | ARS27A, RS27A | component *(eS27) of small ribosomal-subunit (SSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Azfi_s0182.g056413 | ARS27A, RS27A | component *(eS27) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g12663 | ARS27A, RS27A | component *(eS27) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g12664 | ARS27A, RS27A | component *(eS27) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00001299.2 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.1 | OrthoFinder output from all 47 species | |
| Cre02.g145250 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Cre12.g529400 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.06 | OrthoFinder output from all 47 species | |
| Dac_g17983 | ARS27A, RS27A | component *(eS27) of small ribosomal-subunit (SSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Dac_g40966 | ARS27A, RS27A | component *(eS27) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g20815 | ARS27A, RS27A | component *(eS27) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g35625 | ARS27A, RS27A | component *(eS27) of small ribosomal-subunit (SSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Dcu_g35656 | ARS27A, RS27A | component *(eS27) of small ribosomal-subunit (SSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Dde_g00057 | ARS27A, RS27A | component *(eS27) of small ribosomal-subunit (SSU)... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01001113001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.08 | OrthoFinder output from all 47 species | |
| GSVIVT01032964001 | ARS27A, RS27A | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.07 | OrthoFinder output from all 47 species | |
| Lfl_g15035 | ARS27A, RS27A | component *(eS27) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g40961 | ARS27A, RS27A | component *(eS27) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| MA_54625g0010 | ARS27A, RS27A | component RPS27 of SSU proteome | 0.06 | OrthoFinder output from all 47 species | |
| Mp5g09510.1 | No alias | component RPS27 of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g56991 | ARS27A, RS27A | component *(eS27) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c1_15840V3.1 | Pp3c1_15840 | ribosomal protein S27 | 0.1 | OrthoFinder output from all 47 species | |
| Pp3c22_18310V3.1 | ARS27A, RS27A,... | ribosomal protein S27 | 0.07 | OrthoFinder output from all 47 species | |
| Pp3c2_20540V3.1 | ARS27A, RS27A,... | ribosomal protein S27 | 0.06 | OrthoFinder output from all 47 species | |
| Sam_g47394 | No alias | component *(eS27) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Smo163947 | ARS27A, RS27A | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.1 | OrthoFinder output from all 47 species | |
| Spa_g16488 | ARS27A, RS27A | component *(eS27) of small ribosomal-subunit (SSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Spa_g53353 | ARS27A, RS27A | component *(eS27) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g55045 | ARS27A, RS27A | component *(eS27) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g24199 | ARS27A, RS27A | component *(eS27) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e024704_P001 | ARS27A, RS27A,... | component RPS27 of SSU proteome | 0.13 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005839 | proteasome core complex | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006801 | superoxide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009056 | catabolic process | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0072593 | reactive oxygen species metabolic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
