Ceric.05G030500.1 (Ceric.05G030500)


Aliases : Ceric.05G030500

Description : pectin methylesterase & original description: pacid=50577350 polypeptide=Ceric.05G030500.1.p locus=Ceric.05G030500 ID=Ceric.05G030500.1.v2.1 annot-version=v2.1


Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.05G030500.1

Target Alias Description ECC score Gene Family Method Actions
Aev_g10289 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02833 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g01243 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02507 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g06584 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07992 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16751 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g20021 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g20602 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g21373 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g22415 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g56742 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene31942.t1 Aspi01Gene31942 pectin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene59355.t1 Aspi01Gene59355 pectin methylesterase & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g03729 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g12205 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.29G054600.1 Ceric.29G054600 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g05020 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23541 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g28954 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g25225 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009729001 ATPE11, PE11 Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
GSVIVT01015290001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
Len_g15122 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13329 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g01612 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g52907 VGD1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g29894 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0207.g025813 No alias pectin methylesterase & original description: CDS=1-1236 0.02 OrthoFinder output from all 47 species
Spa_g29457 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g37234 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g38344 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g41355 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 87 373
No external refs found!