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  5. Ceric.05G037000.1

Ceric.05G037000.1 (ATWBC11, ABCG11, DSO,...)


Aliases : ATWBC11, ABCG11, DSO, COF1, WBC11, Ceric.05G037000

Description : subfamily ABCG transporter & original description: pacid=50578564 polypeptide=Ceric.05G037000.1.p locus=Ceric.05G037000 ID=Ceric.05G037000.1.v2.1 annot-version=v2.1


Gene families : OG0000139 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000139_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.05G037000.1
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Aev_g05451 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g35102 ATWBC11, ABCG11,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g32324 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g30079 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003413001 ATWBC11, ABCG11,... Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
LOC_Os12g22120.1 ATNAP12, NAP12,... ABC transporter G family member 12 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os12g22284.1 ATWBC11, ABCG11,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Len_g22633 ATWBC11, ABCG11,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp4g11430.1 ATWBC11, ABCG11,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Msp_g32037 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g29286 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000545 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: CDS=630-2756 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004346 ATWBC11, ABCG11,... not classified & original description: CDS=5-1900 0.03 OrthoFinder output from all 47 species
Sam_g24075 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Smo127827 ATWBC11, ABCG11,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Smo127931 ATWBC11, ABCG11,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Smo171782 No alias Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Tin_g26365 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 32 183
IPR043926 ABCG_dom 212 269
IPR013525 ABC_2_trans 333 542
No external refs found!