Aliases : RPL16, Ceric.05G052200
Description : not classified & original description: pacid=50577977 polypeptide=Ceric.05G052200.1.p locus=Ceric.05G052200 ID=Ceric.05G052200.1.v2.1 annot-version=v2.1
Gene families : OG0004825 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004825_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ceric.05G052200.1 | |
| Cluster | HCCA: Cluster_43 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s02809p00000680 | evm_27.TU.AmTr_v1... | 50S ribosomal protein L16, chloroplastic OS=Amborella trichopoda | 0.05 | OrthoFinder output from all 47 species | |
| ATCG00790 | RPL16 | ribosomal protein L16 | 0.15 | OrthoFinder output from all 47 species | |
| ATMG00080 | RPL16 | ribosomal protein L16 | 0.12 | OrthoFinder output from all 47 species | |
| Aob_g10973 | RPL16 | component *(uL16m) of large mitoribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g00855 | RPL16 | component *(uL16m) of large mitoribosomal-subunit... | 0.11 | OrthoFinder output from all 47 species | |
| Ceric.29G004300.1 | RPL16, Ceric.29G004300 | not classified & original description: pacid=50624823... | 0.13 | OrthoFinder output from all 47 species | |
| Ceric.35G023300.1 | RPL16, Ceric.35G023300 | not classified & original description: pacid=50581973... | 0.02 | OrthoFinder output from all 47 species | |
| Cre06.g278224 | No alias | 60S ribosomal protein L16, mitochondrial OS=Prototheca... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_05912 | RPL16 | component mtRPL16 of large ribosomal subunit proteome | 0.1 | OrthoFinder output from all 47 species | |
| Gb_40955 | RPL16 | 50S ribosomal protein L16, chloroplastic... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g57958.1 | LOC_Os01g57958 | 50S ribosomal protein L16, chloroplastic OS=Oryza nivara... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os04g16826.1 | LOC_Os04g16826 | 50S ribosomal protein L16, chloroplastic OS=Oryza nivara... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os10g21344.1 | LOC_Os10g21344 | 50S ribosomal protein L16, chloroplastic OS=Oryza nivara... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os12g34128.1 | LOC_Os12g34128 | component mtRPL16 of large ribosomal subunit proteome | 0.05 | OrthoFinder output from all 47 species | |
| Mp1g22400.1 | No alias | 60S ribosomal protein L16, mitochondrial OS=Marchantia... | 0.06 | OrthoFinder output from all 47 species | |
| Ore_g00369 | RPL16 | component *(uL16c) of large plastid ribosomal-subunit... | 0.16 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s3366.g028729 | RPL16 | component *(uL16c) of large plastid ribosomal-subunit... | 0.11 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s3471.g028812 | RPL16 | component *(uL16c) of large plastid ribosomal-subunit... | 0.11 | OrthoFinder output from all 47 species | |
| Sam_g33347 | No alias | component *(uL16m) of large mitoribosomal-subunit... | 0.08 | OrthoFinder output from all 47 species | |
| Smo137887 | RPL16 | 50S ribosomal protein L16, chloroplastic OS=Huperzia lucidula | 0.08 | OrthoFinder output from all 47 species | |
| Solyc00g500245.1.1 | Solyc00g500245 | component mtRPL16 of large ribosomal subunit proteome.... | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000287 | magnesium ion binding | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
| BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | HCCA |
| BP | GO:0006754 | ATP biosynthetic process | IEP | HCCA |
| BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
| BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0015977 | carbon fixation | IEP | HCCA |
| BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0016831 | carboxy-lyase activity | IEP | HCCA |
| MF | GO:0016984 | ribulose-bisphosphate carboxylase activity | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| BP | GO:0019637 | organophosphate metabolic process | IEP | HCCA |
| BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
| BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | HCCA |
| BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
| BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1902600 | proton transmembrane transport | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
