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  5. Ceric.06G028600.1

Ceric.06G028600.1 (PSBA, Ceric.06G028600)


Aliases : PSBA, Ceric.06G028600

Description : component *(PsbA/D1) of PS-II reaction center complex & original description: pacid=50619431 polypeptide=Ceric.06G028600.1.p locus=Ceric.06G028600 ID=Ceric.06G028600.1.v2.1 annot-version=v2.1


Gene families : OG0001107 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001107_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.06G028600.1
Cluster HCCA: Cluster_288

Target Alias Description ECC score Gene Family Method Actions
ATCG00020 PSBA photosystem II reaction center protein A 0.02 OrthoFinder output from all 47 species
ATCG00270 PSBD photosystem II reaction center protein D 0.02 OrthoFinder output from all 47 species
Adi_g101196 PSBD component *(PsbD/D2) of PS-II reaction center complex &... 0.03 OrthoFinder output from all 47 species
Aev_g33560 PSBD component *(PsbD/D2) of PS-II reaction center complex &... 0.02 OrthoFinder output from all 47 species
Aob_g01728 PSBA component *(PsbA/D1) of PS-II reaction center complex &... 0.02 OrthoFinder output from all 47 species
GSVIVT01010924001 PSBD Photosystem II D2 protein OS=Vitis vinifera 0.09 OrthoFinder output from all 47 species
LOC_Os10g21192.1 PSBA, LOC_Os10g21192 component PsbA/D1 of PS-II reaction center complex 0.03 OrthoFinder output from all 47 species
Ore_g00373 PSBA component *(PsbA/D1) of PS-II reaction center complex &... 0.02 OrthoFinder output from all 47 species
Ore_g12399 PSBD component *(PsbD/D2) of PS-II reaction center complex &... 0.02 OrthoFinder output from all 47 species
Smo137879 PSBD Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.04 OrthoFinder output from all 47 species
Smo139195 PSBA Photosystem II protein D1 OS=Phalaenopsis aphrodite... 0.03 OrthoFinder output from all 47 species
Smo236852 PSBA Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.04 OrthoFinder output from all 47 species
Solyc00g500130.1.1 PSBA, Solyc00g500130 component PsbA/D1 of PS-II reaction center complex 0.02 OrthoFinder output from all 47 species
Solyc00g500200.1.1 PSBA, Solyc00g500200 component PsbA/D1 of PS-II reaction center complex 0.02 OrthoFinder output from all 47 species
Solyc00g500296.1.1 PSBA, Solyc00g500296 component PsbA/D1 of PS-II reaction center complex 0.02 OrthoFinder output from all 47 species
Solyc00g500329.1.1 PSBA, Solyc00g500329 component PsbA/D1 of PS-II reaction center complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009772 photosynthetic electron transport in photosystem II IEA Interproscan
BP GO:0019684 photosynthesis, light reaction IEA Interproscan
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000484 Photo_RC_L/M 28 292
No external refs found!