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  5. Ceric.06G059500.1

Ceric.06G059500.1 (SGR4, ZIG1, VTI1A,...)


Aliases : SGR4, ZIG1, VTI1A, ATVTI11, VTI11, ZIG, ATVTI1A, Ceric.06G059500

Description : Qb-type VTI-group component of SNARE membrane fusion complex & original description: pacid=50619185 polypeptide=Ceric.06G059500.1.p locus=Ceric.06G059500 ID=Ceric.06G059500.1.v2.1 annot-version=v2.1


Gene families : OG0002267 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002267_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.06G059500.1

Target Alias Description ECC score Gene Family Method Actions
AT5G39510 SGR4, ZIG1,... Vesicle transport v-SNARE family protein 0.03 OrthoFinder output from all 47 species
Adi_g008513 SGR4, ZIG1,... Qb-type VTI-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Aop_g25830 SGR4, ZIG1,... Qb-type VTI-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Azfi_s0002.g001214 SGR4, ZIG1,... Qb-type VTI-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Azfi_s0069.g036538 SGR4, ZIG1,... Qb-type VTI-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Cba_g08457 SGR4, ZIG1,... Qb-type VTI-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Cre13.g577500 VTI12, VTI1B, ATVTI12 Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder output from all 47 species
GSVIVT01007964001 ATVTI13, VTI13 Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from all 47 species
LOC_Os01g37980.1 ATVTI13, VTI13,... VTI group Qb-type SNARE protein 0.05 OrthoFinder output from all 47 species
LOC_Os01g51120.1 ATVTI13, VTI13,... VTI group Qb-type SNARE protein 0.04 OrthoFinder output from all 47 species
Len_g23602 SGR4, ZIG1,... Qb-type VTI-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Nbi_g00258 ATVTI13, VTI13 Qb-type VTI-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Sam_g24606 No alias Qb-type VTI-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Smo146421 SGR4, ZIG1,... Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from all 47 species
Solyc05g013050.3.1 VTI12, VTI1B,... VTI group Qb-type SNARE protein 0.04 OrthoFinder output from all 47 species
Spa_g48510 SGR4, ZIG1,... Qb-type VTI-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Zm00001e020013_P001 ATVTI13, VTI13,... VTI group Qb-type SNARE protein 0.03 OrthoFinder output from all 47 species
Zm00001e028148_P001 ATVTI13, VTI13,... VTI group Qb-type SNARE protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR007705 Vesicle_trsprt_v-SNARE_N 12 90
No external refs found!