Aliases : EXPB1, ATEXPB1, ATHEXP BETA 1.5, Ceric.06G060200
Description : not classified & original description: pacid=50620745 polypeptide=Ceric.06G060200.1.p locus=Ceric.06G060200 ID=Ceric.06G060200.1.v2.1 annot-version=v2.1
Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ceric.06G060200.1 | |
| Cluster | HCCA: Cluster_28 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00195390 | ATHEXP BETA 3.1,... | Cell wall.cell wall proteins.expansins.beta-like-type expansin | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00010p00264980 | ATEXPA1, EXP1,... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.03 | OrthoFinder output from all 47 species | |
| AT2G37640 | ATEXPA3, EXP3,... | Barwin-like endoglucanases superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT3G15370 | ATHEXP ALPHA... | expansin 12 | 0.02 | OrthoFinder output from all 47 species | |
| AT3G45960 | ATEXLA3, EXPL3,... | expansin-like A3 | 0.02 | OrthoFinder output from all 47 species | |
| AT3G45970 | ATEXLA1, EXPL1,... | expansin-like A1 | 0.03 | OrthoFinder output from all 47 species | |
| AT4G17030 | ATHEXP BETA 3.1,... | expansin-like B1 | 0.04 | OrthoFinder output from all 47 species | |
| AT5G02260 | EXP9, EXPA9,... | expansin A9 | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g17560 | ATEXPA10,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g39346 | ATEXPA10,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g20858 | ATEXPA10,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g22877 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g26350 | ATEXPA10,... | alpha-class expansin & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g02221 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g14978 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g07935 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g07936 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g13184 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g36017 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g44449 | ATEXPA10,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene14225.t1 | ATEXPA4, ATEXP4,... | alpha-class expansin & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene42895.t1 | ATEXPA1, EXP1,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene52606.t1 | EXPB3, ATEXPB3,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0117.g046537 | EXP15, ATEXPA15,... | alpha-class expansin & original description: CDS=74-868 | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g03639 | ATEXPA10,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g56176 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.17G040400.1 | Ceric.17G040400 | not classified & original description: pacid=50618134... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g10261 | ATEXPA10,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g14133 | ATEXPA10,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g15610 | ATEXPA10,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g16993 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g16994 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g40575 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g11792 | ATEXPA3, EXP3,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g19493 | ATEXPA10,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01004469001 | No alias | Expansin-like B1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01005915001 | ATHEXP BETA 3.1,... | Cell wall.cell wall proteins.expansins.beta-like-type expansin | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01028474001 | ATEXPA25,... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01032681001 | EXPA8, ATHEXP... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.03 | OrthoFinder output from all 47 species | |
| Gb_07435 | EXPA8, ATHEXP... | alpha-class expansin | 0.04 | OrthoFinder output from all 47 species | |
| Gb_09118 | No alias | alpha-class expansin | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g44108.1 | ATHEXP BETA 1.4,... | Expansin-B11 OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g03621 | ATEXPA3, EXP3,... | alpha-class expansin & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g15335 | EXPB3, ATEXPB3,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18380 | ATEXPA11, ATHEXP... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g35332 | ATEXPA11, ATHEXP... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_10429288g0020 | EXPA2, ATHEXP... | Expansin-A2 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| MA_21214g0010 | EXPB3, ATEXPB3,... | beta-class expansin | 0.03 | OrthoFinder output from all 47 species | |
| MA_2687768g0010 | EXPA8, ATHEXP... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
| MA_36587g0010 | EXPA8, ATHEXP... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g37017 | ATEXPA4, ATEXP4,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g06079 | ATEXPA10,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g08930 | EXPB1, ATEXPB1,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g09043 | ATEXPA10,... | alpha-class expansin & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g20452 | ATEXPA10,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g27815 | ATEXPA3, EXP3,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g27816 | ATEXPA3, EXP3,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g30072 | ATEXPA4, ATEXP4,... | alpha-class expansin & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g02838 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g06771 | ATEXPA10,... | alpha-class expansin & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g08538 | ATEXPA10,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g30057 | ATEXPA3, EXP3,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g32028 | ATEXPA10,... | alpha-class expansin & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0009.g004587 | ATEXPA10,... | alpha-class expansin & original description: CDS=259-1032 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0028.g009901 | ATEXPA10,... | alpha-class expansin & original description: CDS=444-1193 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0132.g022152 | EXPB3, ATEXPB3,... | not classified & original description: CDS=169-1023 | 0.03 | OrthoFinder output from all 47 species | |
| Smo230202 | EXPA2, ATHEXP... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.03 | OrthoFinder output from all 47 species | |
| Smo91129 | EXP15, ATEXPA15,... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g088100.3.1 | ATEXPA10,... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g081870.4.1 | ATEXPA11, ATHEXP... | alpha-class expansin | 0.04 | OrthoFinder output from all 47 species | |
| Solyc06g005560.4.1 | ATEXPA4, ATEXP4,... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g060970.2.1 | ATHEXP BETA 3.1,... | beta-like-class expansin | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g010860.4.1 | ATEXPA3, EXP3,... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g25561 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g45520 | ATEXPA4, ATEXP4,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g54039 | ATEXPA1, EXP1,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g03133 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g06848 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g14286 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g32125 | ATEXPA1, EXP1,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e000266_P002 | ATEXLA1, EXPL1,... | alpha-like-class expansin | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e002332_P001 | ATHEXP BETA 1.4,... | Expansin-B4 OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e004714_P001 | ATEXPA11, ATHEXP... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e004716_P001 | ATEXPA11, ATHEXP... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e007438_P001 | EXPB3, ATEXPB3,... | beta-class expansin | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e015336_P002 | ATHEXP BETA 1.1,... | Expansin-B11 OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e037914_P002 | ATHEXP BETA 1.4,... | Expansin-B9 OS=Zea mays (sp|q07154|expb9_maize : 487.0) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e038997_P001 | ATEXPA11, ATHEXP... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000786 | nucleosome | IEP | HCCA |
| BP | GO:0006325 | chromatin organization | IEP | HCCA |
| BP | GO:0006334 | nucleosome assembly | IEP | HCCA |
| BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
| CC | GO:0032993 | protein-DNA complex | IEP | HCCA |
| BP | GO:0034728 | nucleosome organization | IEP | HCCA |
| BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
| CC | GO:0044815 | DNA packaging complex | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | HCCA |
| BP | GO:0071824 | protein-DNA complex subunit organization | IEP | HCCA |
| No external refs found! |
