Ceric.07G010800.1 (PGP11, Ceric.07G010800)

Aliases : PGP11, Ceric.07G010800

Description : subfamily ABCB transporter & original description: pacid=50627050 polypeptide=Ceric.07G010800.1.p locus=Ceric.07G010800 ID=Ceric.07G010800.1.v2.1 annot-version=v2.1

Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.07G010800.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00263610	ABCB19,...	Solute transport.primary active transport.ABC...	0.05	OrthoFinder output from all 47 species
Adi_g029160	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g056640	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g056650	ABCB19,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g056680	No alias	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g17861	ABCB19,...	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Ala_g26381	No alias	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g12898	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene05873.t1	ABCB19,...	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene08469.t1	PGP11, Aspi01Gene08469	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene10110.t1	ABCB19,...	ABC-B-type transporter *(AMN3) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene42787.t1	ATPGP4, PGP4,...	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene42791.t1	PGP21, Aspi01Gene42791	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene62048.t1	PGP2, Aspi01Gene62048	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene62053.t1	ABCB19,...	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Dac_g35993	PGP11	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Dac_g37248	PGP9	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g20229	PGP11	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g28161	PGP11	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g13730	No alias	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
GSVIVT01015306001	No alias	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
GSVIVT01016706001	ABCB19,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Gb_23626	No alias	subfamily ABCB transporter	0.07	OrthoFinder output from all 47 species
LOC_Os01g74630.1	PGP11, LOC_Os01g74630	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
LOC_Os08g45030.1	PGP1, ABCB1,...	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Lfl_g16192	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g37290	PGP11	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g33236	ABCB19,...	ABC-B-type transporter *(AMN3) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g38163	PGP1, ABCB1, ATPGP1	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g60650	PGP21	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g12991	ABCB19,...	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g16181	PGP11	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002681	ABCB19,...	regulatory protein *(HY5) of UV-B signal transduction &...	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010416	ABCB19,...	subfamily ABCB transporter & original description: CDS=327-1289	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0214.g026004	No alias	subfamily ABCB transporter & original description: CDS=930-4592	0.01	OrthoFinder output from all 47 species
Sam_g49529	No alias	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Smo84555	ABCB19,...	Solute transport.primary active transport.ABC...	0.12	OrthoFinder output from all 47 species
Solyc03g005860.4.1	PGP11, Solyc03g005860	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
Zm00001e003866_P001	PGP1, ABCB1,...	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Zm00001e028117_P001	PGP11, Zm00001e028117	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	389	539
IPR003439	ABC_transporter-like_ATP-bd	1082	1223
IPR011527	ABC1_TM_dom	47	319
IPR011527	ABC1_TM_dom	716	983

External Links

No external refs found!

Ceric.07G010800.1 (PGP11, Ceric.07G010800)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation