Aliases : Ceric.07G056500
Description : component *(uS3c) of small plastid ribosomal-subunit proteome & original description: pacid=50627635 polypeptide=Ceric.07G056500.1.p locus=Ceric.07G056500 ID=Ceric.07G056500.1.v2.1 annot-version=v2.1
Gene families : OG0006596 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006596_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ceric.07G056500.1 | |
| Cluster | HCCA: Cluster_58 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| ATCG00800 | No alias | structural constituent of ribosome | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g14422 | No alias | component *(uS3c) of small plastid ribosomal-subunit... | 0.08 | OrthoFinder output from all 47 species | |
| Ceric.05G052300.1 | Ceric.05G052300 | component *(uS3c) of small plastid ribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
| Ceric.1Z164000.1 | Ceric.1Z164000 | not classified & original description: pacid=50596956... | 0.07 | OrthoFinder output from all 47 species | |
| Dcu_g13090 | No alias | component *(uS3c) of small plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os04g16824.1 | LOC_Os04g16824 | component psRPS3 of small ribosomal subunit proteome | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os09g24416.1 | LOC_Os09g24416 | component psRPS3 of small ribosomal subunit proteome | 0.07 | OrthoFinder output from all 47 species | |
| Lfl_g28864 | No alias | component *(uS3c) of small plastid ribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
| Ore_g10343 | No alias | component *(uS3c) of small plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g00314 | No alias | component *(uS3c) of small plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
| BP | GO:0006412 | translation | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003954 | NADH dehydrogenase activity | IEP | HCCA |
| MF | GO:0003955 | NAD(P)H dehydrogenase (quinone) activity | IEP | HCCA |
| MF | GO:0004807 | triose-phosphate isomerase activity | IEP | HCCA |
| MF | GO:0008137 | NADH dehydrogenase (ubiquinone) activity | IEP | HCCA |
| MF | GO:0015453 | oxidoreduction-driven active transmembrane transporter activity | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | HCCA |
| MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | HCCA |
| MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | HCCA |
| MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | HCCA |
| MF | GO:0050136 | NADH dehydrogenase (quinone) activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001351 | Ribosomal_S3_C | 115 | 197 |
| No external refs found! |
