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  5. Ceric.08G022000.1

Ceric.08G022000.1 (RAP2.12, Ceric.08G022000)


Aliases : RAP2.12, Ceric.08G022000

Description : transcription factor component *(HRE/RAP2.12) of oxygen-sensor activity & original description: pacid=50638625 polypeptide=Ceric.08G022000.1.p locus=Ceric.08G022000 ID=Ceric.08G022000.1.v2.1 annot-version=v2.1


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.08G022000.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00092590 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AMTR_s00095p00094910 HRD,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.08 OrthoFinder output from all 47 species
AT5G13910 LEP Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G25810 tny Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g00499 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g21810 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.02 OrthoFinder output from all 47 species
Aop_g05895 DREB26 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene09185.t1 RAP2.2, Aspi01Gene09185 transcription factor component *(HRE/RAP2.12) of... 0.04 OrthoFinder output from all 47 species
Aspi01Gene11848.t2 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene25519.t1 ORA47, Aspi01Gene25519 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene49728.t1 HRE2, Aspi01Gene49728 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g06247 ERF72, EBP, ATEBP, RAP2.3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g27111 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g03832 No alias subgroup ERF-I transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07677 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.04 OrthoFinder output from all 47 species
Dde_g26140 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01022109001 No alias No description available 0.08 OrthoFinder output from all 47 species
GSVIVT01028316001 No alias No description available 0.06 OrthoFinder output from all 47 species
LOC_Os02g38090.1 ESR1, DRN, LOC_Os02g38090 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os04g46400.1 LOC_Os04g46400 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
LOC_Os06g10780.1 LOC_Os06g10780 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Lfl_g06554 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.1 OrthoFinder output from all 47 species
MA_912855g0010 ERF-1, ATERF-1 transcription factor (ERF) 0.06 OrthoFinder output from all 47 species
Ore_g43707 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g17102 ERF2, ATERF2, ATERF-2 subgroup ERF-IX transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012398 DEAR1, CEJ1, ATERF#011 not classified & original description: CDS=1-1134 0.02 OrthoFinder output from all 47 species
Smo104980 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
Solyc06g066540.1.1 TINY2, Solyc06g066540 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
Spa_g56350 No alias subgroup ERF-III transcription factor & original... 0.08 OrthoFinder output from all 47 species
Zm00001e034741_P001 RAP2.11, Zm00001e034741 transcription factor (ERF). transcription factor (ERN1) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 153 201
No external refs found!