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  5. Ceric.08G025200.1

Ceric.08G025200.1 (Ceric.08G025200)


Aliases : Ceric.08G025200

Description : not classified & original description: pacid=50638798 polypeptide=Ceric.08G025200.1.p locus=Ceric.08G025200 ID=Ceric.08G025200.1.v2.1 annot-version=v2.1


Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.08G025200.1

Target Alias Description ECC score Gene Family Method Actions
AT1G29340 ATPUB17, PUB17 plant U-box 17 0.04 OrthoFinder output from all 47 species
Als_g31832 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g00412 PUB14, ATPUB14 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.13G074400.1 ATPUB17, PUB17,... E3 ubiquitin ligase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.26G012900.1 Ceric.26G012900 not classified & original description: pacid=50598948... 0.03 OrthoFinder output from all 47 species
Ceric.35G012000.1 PUB13, ATPUB13,... E3 ubiquitin ligase & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g13651 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g01773 ATPUB17, PUB17 E3 ubiquitin ligase & original description: none 0.06 OrthoFinder output from all 47 species
LOC_Os02g28720.1 PUB9, ATPUB9,... E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species
MA_186051g0010 PUB9, ATPUB9 E3 ubiquitin ligase (PUB) 0.04 OrthoFinder output from all 47 species
Nbi_g14682 ATPUB45, PUB45 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g04960 PUB14, ATPUB14 E3 ubiquitin ligase *(PUB8) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g05165 ATPUB17, PUB17 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g056450.4.1 PUB9, ATPUB9,... U-box domain-containing protein 9 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Spa_g05552 ATPUB17, PUB17 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07352 ATPUB17, PUB17 E3 ubiquiTin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e014377_P001 ATPUB17, PUB17,... U-box domain-containing protein 4 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
InterPro domains Description Start Stop
IPR000225 Armadillo 429 458
IPR003613 Ubox_domain 286 355
No external refs found!