Ceric.08G035400.1 (Ceric.08G035400)

Aliases : Ceric.08G035400

Description : EC_6.1 ligase forming carbon-oxygen bond & original description: pacid=50638030 polypeptide=Ceric.08G035400.1.p locus=Ceric.08G035400 ID=Ceric.08G035400.1.v2.1 annot-version=v2.1

Gene families : OG0004431 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004431_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.08G035400.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00209p00023450	evm_27.TU.AmTr_v1...	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.03	OrthoFinder output from all 47 species
AT4G13780	No alias	methionine--tRNA ligase, putative / methionyl-tRNA...	0.03	OrthoFinder output from all 47 species
Aev_g06133	No alias	EC_6.1 ligase forming carbon-oxygen bond & original...	0.03	OrthoFinder output from all 47 species
Aob_g02309	No alias	EC_6.1 ligase forming carbon-oxygen bond & original...	0.04	OrthoFinder output from all 47 species
Aop_g00778	No alias	EC_6.1 ligase forming carbon-oxygen bond & original...	0.03	OrthoFinder output from all 47 species
Azfi_s0128.g048806	No alias	EC_6.1 ligase forming carbon-oxygen bond & original...	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020614.25	No alias	Probable methionine--tRNA ligase OS=Oryza sativa subsp. japonica	0.02	OrthoFinder output from all 47 species
Cre02.g087950	No alias	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.03	OrthoFinder output from all 47 species
Dde_g08658	No alias	EC_6.1 ligase forming carbon-oxygen bond & original...	0.02	OrthoFinder output from all 47 species
GSVIVT01020924001	No alias	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.03	OrthoFinder output from all 47 species
LOC_Os06g31210.1	LOC_Os06g31210	methionine-tRNA ligase	0.08	OrthoFinder output from all 47 species
MA_10427001g0020	No alias	Probable methionine--tRNA ligase OS=Oryza sativa subsp....	0.02	OrthoFinder output from all 47 species
MA_10436199g0010	No alias	methionine-tRNA ligase	0.02	OrthoFinder output from all 47 species
Mp6g20530.1	No alias	methionine-tRNA ligase	0.07	OrthoFinder output from all 47 species
Pp3c13_2300V3.1	Pp3c13_2300	methionine--tRNA ligase, putative / methionyl-tRNA...	0.02	OrthoFinder output from all 47 species
Smo164891	No alias	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.05	OrthoFinder output from all 47 species
Tin_g12163	No alias	EC_6.1 ligase forming carbon-oxygen bond & original...	0.02	OrthoFinder output from all 47 species
Zm00001e000847_P001	Zm00001e000847	methionine-tRNA ligase	0.07	OrthoFinder output from all 47 species
Zm00001e038714_P001	Zm00001e038714	methionine-tRNA ligase	0.07	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEA	Interproscan
MF	GO:0000166	nucleotide binding	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006418	tRNA aminoacylation for protein translation	IEA	Interproscan
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0043038	amino acid activation	None	Extended
BP	GO:0043039	tRNA aminoacylation	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140101	catalytic activity, acting on a tRNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	HCCA
MF	GO:0003937	IMP cyclohydrolase activity	IEP	HCCA
MF	GO:0004643	phosphoribosylaminoimidazolecarboxamide formyltransferase activity	IEP	HCCA
MF	GO:0004814	arginine-tRNA ligase activity	IEP	HCCA
MF	GO:0004826	phenylalanine-tRNA ligase activity	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
BP	GO:0006099	tricarboxylic acid cycle	IEP	HCCA
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006420	arginyl-tRNA aminoacylation	IEP	HCCA
BP	GO:0006432	phenylalanyl-tRNA aminoacylation	IEP	HCCA
BP	GO:0006486	protein glycosylation	IEP	HCCA
BP	GO:0006487	protein N-linked glycosylation	IEP	HCCA
CC	GO:0008250	oligosaccharyltransferase complex	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
MF	GO:0016742	hydroxymethyl-, formyl- and related transferase activity	IEP	HCCA
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	HCCA
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	IEP	HCCA
MF	GO:0019238	cyclohydrolase activity	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
CC	GO:0140534	endoplasmic reticulum protein-containing complex	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA
CC	GO:1990234	transferase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR041872	Anticodon_Met	436	582
IPR015413	Methionyl/Leucyl_tRNA_Synth	16	407
IPR002547	tRNA-bd_dom	644	738

External Links

No external refs found!

Ceric.08G035400.1 (Ceric.08G035400)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation