Aliases : LBD38, Ceric.08G070700
Description : AS2/LOB-type transcription factor & original description: pacid=50638383 polypeptide=Ceric.08G070700.1.p locus=Ceric.08G070700 ID=Ceric.08G070700.1.v2.1 annot-version=v2.1
Gene families : OG0001073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001073_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ceric.08G070700.1 | |
| Cluster | HCCA: Cluster_93 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00137p00087340 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.08 | OrthoFinder output from all 47 species | |
| AT1G67100 | LBD40 | LOB domain-containing protein 40 | 0.03 | OrthoFinder output from all 47 species | |
| AT5G67420 | LBD37, ASL39 | LOB domain-containing protein 37 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g13473 | LBD38 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01000141001 | LBD38 | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01031035001 | No alias | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g20800.1 | LOC_Os01g20800 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g32770.1 | LBD41, LOC_Os01g32770 | transcription factor (AS2/LOB) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os03g33090.1 | LOC_Os03g33090 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| MA_223267g0010 | LBD40 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| MA_70989g0010 | LBD40 | transcription factor (AS2/LOB) | 0.04 | OrthoFinder output from all 47 species | |
| Mp3g12980.1 | LBD37, ASL39 | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g27119 | LBD38 | AS2/LOB-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Smo105005 | LBD38 | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc03g119530.3.1 | LBD41, Solyc03g119530 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g077990.3.1 | LBD38, Solyc04g077990 | transcription factor (AS2/LOB) | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g14153 | LBD38 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e001981_P001 | LBD41, Zm00001e001981 | transcription factor (AS2/LOB) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e005129_P001 | LBD37, ASL39,... | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e027415_P001 | LBD41, Zm00001e027415 | transcription factor (AS2/LOB) | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e032150_P001 | LBD41, Zm00001e032150 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0005984 | disaccharide metabolic process | IEP | HCCA |
| BP | GO:0005991 | trehalose metabolic process | IEP | HCCA |
| BP | GO:0005992 | trehalose biosynthetic process | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0009311 | oligosaccharide metabolic process | IEP | HCCA |
| BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0046351 | disaccharide biosynthetic process | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004883 | LOB | 2 | 100 |
| No external refs found! |
