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  5. Ceric.09G024000.1

Ceric.09G024000.1 (EMB2261, Ceric.09G024000)


Aliases : EMB2261, Ceric.09G024000

Description : not classified & original description: pacid=50587738 polypeptide=Ceric.09G024000.1.p locus=Ceric.09G024000 ID=Ceric.09G024000.1.v2.1 annot-version=v2.1


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.09G024000.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00032470 No alias Pentatricopeptide repeat-containing protein At1g25360... 0.05 OrthoFinder output from all 47 species
Adi_g099319 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g38090 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene09926.t1 CRR22, Aspi01Gene09926 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene13090.t2 Aspi01Gene13090 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene14256.t1 Aspi01Gene14256 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene24113.t1 VAC1, ECB2,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0005.g009250 DOT4 not classified & original description: CDS=1-1692 0.05 OrthoFinder output from all 47 species
Cba_g03800 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05556 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.20G003600.1 Ceric.20G003600 not classified & original description: pacid=50567008... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021035.24 No alias Pentatricopeptide repeat-containing protein At1g63080,... 0.01 OrthoFinder output from all 47 species
Dcu_g17105 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g03570 EMB2758 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g16098 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g29737 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01017989001 LOI1, MEF11 RNA processing.organelle machineries.RNA... 0.04 OrthoFinder output from all 47 species
Gb_33439 REME1 Pentatricopeptide repeat-containing protein At4g02750... 0.07 OrthoFinder output from all 47 species
LOC_Os06g39650.1 LOC_Os06g39650 Pentatricopeptide repeat-containing protein At1g31430... 0.03 OrthoFinder output from all 47 species
Msp_g21416 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g05790 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g23638 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g02370 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g06449 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g08807 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g34877 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g63739 DOT4 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g23074 LPA66 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g31446 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57919 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002764 No alias not classified & original description: CDS=1-2754 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013907 No alias not classified & original description: CDS=1-1875 0.02 OrthoFinder output from all 47 species
Sam_g50801 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g114010.3.1 Solyc03g114010 Pentatricopeptide repeat-containing protein At2g29760,... 0.07 OrthoFinder output from all 47 species
Solyc06g048900.1.1 Solyc06g048900 Pentatricopeptide repeat-containing protein At2g40720... 0.03 OrthoFinder output from all 47 species
Solyc07g009220.2.1 Solyc07g009220 Pentatricopeptide repeat-containing protein At2g34400... 0.06 OrthoFinder output from all 47 species
Solyc10g005090.3.1 Solyc10g005090 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Tin_g05998 REME1 not classified & original description: none 0.11 OrthoFinder output from all 47 species
Tin_g09800 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR032867 DYW_dom 631 723
IPR046848 E_motif 533 595
IPR002885 Pentatricopeptide_repeat 415 463
IPR002885 Pentatricopeptide_repeat 314 359
IPR002885 Pentatricopeptide_repeat 213 262
IPR046849 Eplus_motif 601 624
IPR002885 Pentatricopeptide_repeat 115 145
IPR002885 Pentatricopeptide_repeat 390 410
IPR002885 Pentatricopeptide_repeat 491 514
No external refs found!