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  5. Ceric.09G046300.1

Ceric.09G046300.1 (Ceric.09G046300)


Aliases : Ceric.09G046300

Description : component *(U1C) of U1 snRNP complex & original description: pacid=50587408 polypeptide=Ceric.09G046300.1.p locus=Ceric.09G046300 ID=Ceric.09G046300.1.v2.1 annot-version=v2.1


Gene families : OG0002867 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002867_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.09G046300.1

Target Alias Description ECC score Gene Family Method Actions
Cre09.g401300 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.04 OrthoFinder output from all 47 species
Gb_41077 No alias component U1C of U1 small nuclear ribonucleoprotein... 0.03 OrthoFinder output from all 47 species
Nbi_g35029 No alias component *(U1C) of U1 snRNP complex & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g01407 No alias component *(U1C) of U1 snRNP complex & original description: none 0.04 OrthoFinder output from all 47 species
Solyc06g008860.3.1 Solyc06g008860 component U1C of U1 small nuclear ribonucleoprotein... 0.04 OrthoFinder output from all 47 species
Spa_g29133 No alias component *(U1C) of U1 snRNP complex & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013085 U1-CZ_Znf_C2H2 1 38
No external refs found!