Aliases : Ceric.09G066000
Description : RNA chaperone *(RZ1) & original description: pacid=50586865 polypeptide=Ceric.09G066000.1.p locus=Ceric.09G066000 ID=Ceric.09G066000.1.v2.1 annot-version=v2.1
Gene families : OG0000073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000073_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT4G13850 | GRP2, ATGRP2, GR-RBP2 | glycine-rich RNA-binding protein 2 | 0.04 | OrthoFinder output from all 47 species | |
| AT5G61030 | GR-RBP3 | glycine-rich RNA-binding protein 3 | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g021389 | GR-RBP3 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g084466 | GRP2, ATGRP2, GR-RBP2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g05447 | No alias | RNA chaperone *(RZ1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g05819 | No alias | RNA chaperone *(RZ1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g24232 | GR-RBP4, GRP4 | RNA editing factor *(ORRM3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g44798 | GR-RBP3 | RNA editing factor *(ORRM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g01139 | No alias | RNA chaperone *(RZ1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g21798 | No alias | RNA chaperone *(RZ1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene25249.t1 | CCR2, ATGRP7,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0062.g035257 | GRP2, ATGRP2, GR-RBP2 | not classified & original description: CDS=192-584 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0468.g072856 | GR-RBP4, GRP4 | not classified & original description: CDS=1-582 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g01674 | GRP2, ATGRP2, GR-RBP2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g06390 | CCR2, ATGRP7,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g08147 | No alias | RNA chaperone *(RZ1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g08805 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g10857 | GRP2, ATGRP2, GR-RBP2 | RNA editing factor *(ORRM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g14006 | ATRZ-1A | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Cba_g20547 | GRP2, ATGRP2, GR-RBP2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g44420 | No alias | RNA chaperone *(RZ1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Cre09.g392350 | GRP2, ATGRP2, GR-RBP2 | Glycine-rich RNA-binding protein 2, mitochondrial... | 0.01 | OrthoFinder output from all 47 species | |
| Cre17.g729150 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g02153 | No alias | RNA chaperone *(RZ1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g09825 | GR-RBP4, GRP4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g48605 | No alias | RNA chaperone *(RZ1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g16014 | GR-RBP4, GRP4 | RNA editing factor *(ORRM3) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g17136 | GR-RBP4, GRP4 | RNA editing factor *(ORRM3) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g04232 | GRP2, ATGRP2, GR-RBP2 | RNA editing factor *(ORRM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g14326 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01021024001 | GRP2, ATGRP2, GR-RBP2 | RNA processing.organelle machineries.RNA... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01033666001 | No alias | Glycine-rich RNA-binding protein RZ1B OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Gb_18168 | GR-RBP3 | RNA editing factor (ORRM) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os12g31800.1 | GR-RBP3, LOC_Os12g31800 | RNA editing factor (ORRM) | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g21135 | CCR2, ATGRP7,... | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| MA_168323g0010 | No alias | RNA chaperone (RZ1|GR-RBP) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g06624 | GR-RBP3 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g29443 | GR-RBP3 | RNA editing factor *(ORRM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g32203 | GRP2, ATGRP2, GR-RBP2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g23738 | No alias | RNA chaperone *(RZ1) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Pir_g09294 | GR-RBP5 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g12375 | GR-RBP4, GRP4 | RNA editing factor *(ORRM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c4_6610V3.1 | GRP2, ATGRP2,... | glycine-rich RNA-binding protein 3 | 0.01 | OrthoFinder output from all 47 species | |
| Pp3c7_3360V3.1 | CCR1, GR-RBP8,... | cold, circadian rhythm, and RNA binding 1 | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g06306 | No alias | RNA chaperone *(RZ1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g31703 | ATRZ-1A | RNA chaperone *(RZ1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0001.g000635 | GR-RBP3 | RNA editing factor *(ORRM3) & original description: CDS=202-855 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g14736 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g25482 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g35045 | No alias | RNA chaperone *(RZ1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g38661 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Smo81392 | GRP2, ATGRP2, GR-RBP2 | RNA processing.organelle machineries.RNA... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g088790.3.1 | GR-RBP3, Solyc02g088790 | RNA editing factor (ORRM) | 0.05 | OrthoFinder output from all 47 species | |
| Solyc05g053780.4.1 | GRP2, ATGRP2,... | RNA chaperone (RZ1|GR-RBP). RNA editing factor (ORRM) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g081180.2.1 | GR-RBP3, Solyc10g081180 | RNA chaperone (RZ1|GR-RBP). RNA editing factor (ORRM) | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g06392 | No alias | RNA chaperone *(RZ1) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Spa_g10878 | No alias | RNA chaperone *(RZ1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g16011 | ATRZ-1A | RNA chaperone *(RZ1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g22222 | GRP2, ATGRP2, GR-RBP2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g00653 | GR-RBP5 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g04956 | No alias | RNA chaperone *(RZ1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g06526 | No alias | RNA chaperone *(RZ1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g27808 | GR-RBP4, GRP4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e005260_P002 | Zm00001e005260 | RNA chaperone (RZ1|GR-RBP) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e018330_P004 | GR-RBP3, Zm00001e018330 | RNA editing factor (ORRM) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e028481_P002 | GRP2, ATGRP2,... | RNA chaperone (RZ1|GR-RBP). RNA editing factor (ORRM) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e028502_P003 | Zm00001e028502 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e039608_P001 | GR-RBP3, Zm00001e039608 | RNA editing factor (ORRM) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e041378_P001 | Zm00001e041378 | Organelle RRM domain-containing protein 6, chloroplastic... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001522 | pseudouridine synthesis | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006606 | protein import into nucleus | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | HCCA |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | HCCA |
| BP | GO:0033365 | protein localization to organelle | IEP | HCCA |
| BP | GO:0034504 | protein localization to nucleus | IEP | HCCA |
| BP | GO:0042254 | ribosome biogenesis | IEP | HCCA |
| BP | GO:0044085 | cellular component biogenesis | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0051169 | nuclear transport | IEP | HCCA |
| BP | GO:0051170 | import into nucleus | IEP | HCCA |
| MF | GO:0061608 | nuclear import signal receptor activity | IEP | HCCA |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0140104 | molecular carrier activity | IEP | HCCA |
| MF | GO:0140142 | nucleocytoplasmic carrier activity | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| No external refs found! |
