Ceric.10G077900.1 (CH-CPN60A, CPN60A,...)

Aliases : CH-CPN60A, CPN60A, SLP, Ceric.10G077900

Description : chaperone *(Hsp60) & original description: pacid=50612858 polypeptide=Ceric.10G077900.1.p locus=Ceric.10G077900 ID=Ceric.10G077900.1.v2.1 annot-version=v2.1

Gene families : OG0000688 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000688_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.10G077900.1
Cluster	HCCA: Cluster_155

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00009p00080200	CH-CPN60A,...	External stimuli response.temperature.Hsp...	0.03	OrthoFinder output from all 47 species
AMTR_s00062p00185880	CH-CPN60A,...	External stimuli response.temperature.Hsp...	0.03	OrthoFinder output from all 47 species
AT5G18820	EMB3007	TCP-1/cpn60 chaperonin family protein	0.04	OrthoFinder output from all 47 species
AT5G56500	No alias	TCP-1/cpn60 chaperonin family protein	0.03	OrthoFinder output from all 47 species
Adi_g008942	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Adi_g013083	No alias	chaperone *(Hsp60) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g10775	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.07	OrthoFinder output from all 47 species
Als_g43629	CH-CPN60A, CPN60A, SLP	chaperone *(Hsp60) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01012098001	EMB3007	External stimuli response.temperature.Hsp...	0.03	OrthoFinder output from all 47 species
GSVIVT01031526001	CH-CPN60A, CPN60A, SLP	External stimuli response.temperature.Hsp...	0.05	OrthoFinder output from all 47 species
LOC_Os09g38980.1	EMB3007, LOC_Os09g38980	subunit alpha of Cpn60 chaperonin complex. component...	0.03	OrthoFinder output from all 47 species
LOC_Os12g17910.1	CH-CPN60A,...	subunit alpha of Cpn60 chaperonin complex. component...	0.03	OrthoFinder output from all 47 species
Msp_g06450	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g08643	No alias	chaperone *(Hsp60) & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0065.g016064	No alias	chaperone *(Hsp60) & original description: CDS=1-1875	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0182.g024885	CPN60B, LEN1	chaperone *(Hsp60) & original description: CDS=136-1980	0.03	OrthoFinder output from all 47 species
Sam_g39492	No alias	chaperone *(Hsp60) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc02g068730.3.1	EMB3007, Solyc02g068730	subunit alpha of Cpn60 chaperonin complex. component...	0.02	OrthoFinder output from all 47 species
Spa_g38972	CH-CPN60A, CPN60A, SLP	chaperone *(Hsp60) & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g54235	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g12134	CH-CPN60A, CPN60A, SLP	chaperone *(Hsp60) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e037002_P001	CH-CPN60A,...	Chaperonin 60 subunit alpha 1, chloroplastic...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003746	translation elongation factor activity	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
BP	GO:0006414	translational elongation	IEP	HCCA
BP	GO:0006486	protein glycosylation	IEP	HCCA
BP	GO:0006487	protein N-linked glycosylation	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
CC	GO:0008250	oligosaccharyltransferase complex	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:0140534	endoplasmic reticulum protein-containing complex	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA
CC	GO:1990234	transferase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002423	Cpn60/GroEL/TCP-1	83	585

External Links

No external refs found!

Ceric.10G077900.1 (CH-CPN60A, CPN60A,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation