Aliases : DRT111, Ceric.11G091900
Description : pre-mRNA splicing factor *(SFPS/DRT111) & original description: pacid=50596039 polypeptide=Ceric.11G091900.1.p locus=Ceric.11G091900 ID=Ceric.11G091900.1.v2.1 annot-version=v2.1
Gene families : OG0007273 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007273_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ceric.11G091900.1 | |
| Cluster | HCCA: Cluster_121 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g023977 | DRT111 | pre-mRNA splicing factor *(SFPS/DRT111) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g106562 | DRT111 | pre-mRNA splicing factor *(SFPS/DRT111) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g10966 | DRT111 | pre-mRNA splicing factor *(SFPS/DRT111) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g23479 | DRT111 | pre-mRNA splicing factor *(SFPS/DRT111) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g10863 | DRT111 | pre-mRNA splicing factor *(SFPS/DRT111) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0059.g015143 | DRT111 | pre-mRNA splicing factor *(SFPS/DRT111) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g07316 | No alias | pre-mRNA splicing factor *(SFPS/DRT111) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g069790.3.1 | DRT111, Solyc02g069790 | pre-mRNA splicing factor (SPF45/RBM17) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e034397_P001 | DRT111, Zm00001e034397 | pre-mRNA splicing factor (SPF45/RBM17) | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005643 | nuclear pore | IEP | HCCA |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
| BP | GO:0031047 | RNA-mediated gene silencing | IEP | HCCA |
| BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| No external refs found! |
