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  5. Ceric.12G003800.1

Ceric.12G003800.1 (RBR, ATRBR1, RBR1,...)


Aliases : RBR, ATRBR1, RBR1, RB1, RB, Ceric.12G003800

Description : regulatory protein (RBR) of cell cycle interphase & original description: pacid=50600913 polypeptide=Ceric.12G003800.1.p locus=Ceric.12G003800 ID=Ceric.12G003800.1.v2.1 annot-version=v2.1


Gene families : OG0002400 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002400_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.12G003800.1
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
Als_g01960 RBR, ATRBR1,... regulatory protein (RBR) of cell cycle interphase &... 0.09 OrthoFinder output from all 47 species
Aspi01Gene66417.t1 RBR, ATRBR1,... regulatory protein (RBR) of cell cycle interphase &... 0.08 OrthoFinder output from all 47 species
Azfi_s0007.g011185 RBR, ATRBR1,... regulatory protein (RBR) of cell cycle interphase &... 0.05 OrthoFinder output from all 47 species
Azfi_s0075.g037586 RBR, ATRBR1,... regulatory protein (RBR) of cell cycle interphase &... 0.03 OrthoFinder output from all 47 species
Dcu_g42453 RBR, ATRBR1,... regulatory protein (RBR) of cell cycle interphase &... 0.06 OrthoFinder output from all 47 species
Ehy_g05055 RBR, ATRBR1,... regulatory protein (RBR) of cell cycle interphase &... 0.02 OrthoFinder output from all 47 species
Gb_14616 RBR, ATRBR1,... cell cycle interphase key regulator 0.02 OrthoFinder output from all 47 species
LOC_Os08g42600.1 RBR, ATRBR1,... cell cycle interphase key regulator 0.08 OrthoFinder output from all 47 species
MA_10435560g0010 RBR, ATRBR1,... cell cycle interphase key regulator 0.02 OrthoFinder output from all 47 species
Msp_g14075 RBR, ATRBR1,... regulatory protein (RBR) of cell cycle interphase &... 0.05 OrthoFinder output from all 47 species
Nbi_g42458 RBR, ATRBR1,... regulatory protein (RBR) of cell cycle interphase &... 0.15 OrthoFinder output from all 47 species
Ppi_g05934 RBR, ATRBR1,... regulatory protein (RBR) of cell cycle interphase &... 0.13 OrthoFinder output from all 47 species
Sacu_v1.1_s0042.g012798 RBR, ATRBR1,... regulatory protein (RBR) of cell cycle interphase &... 0.03 OrthoFinder output from all 47 species
Solyc09g091280.4.1 RBR, ATRBR1,... cell cycle interphase key regulator 0.06 OrthoFinder output from all 47 species
Spa_g50011 RBR, ATRBR1,... regulatory protein (RBR) of cell cycle interphase &... 0.06 OrthoFinder output from all 47 species
Tin_g13680 RBR, ATRBR1,... regulatory protein (RBR) of cell cycle interphase &... 0.1 OrthoFinder output from all 47 species
Zm00001e003716_P001 RBR, ATRBR1,... cell cycle interphase key regulator 0.14 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
BP GO:0051726 regulation of cell cycle IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003896 DNA primase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010639 negative regulation of organelle organization IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032780 negative regulation of ATP-dependent activity IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
CC GO:0042555 MCM complex IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043462 regulation of ATP-dependent activity IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051095 regulation of helicase activity IEP HCCA
BP GO:0051097 negative regulation of helicase activity IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051129 negative regulation of cellular component organization IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1905462 regulation of DNA duplex unwinding IEP HCCA
BP GO:1905463 negative regulation of DNA duplex unwinding IEP HCCA
BP GO:1905774 regulation of DNA helicase activity IEP HCCA
BP GO:1905775 negative regulation of DNA helicase activity IEP HCCA
BP GO:2001251 negative regulation of chromosome organization IEP HCCA
InterPro domains Description Start Stop
IPR024599 RB_N 106 245
IPR002720 RB_A 427 627
IPR002719 RB_B 750 871
No external refs found!