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  5. Ceric.14G054100.1

Ceric.14G054100.1 (ABCB19, ATABCB19,...)


Aliases : ABCB19, ATABCB19, MDR1, MDR11, ATPGP19, ATMDR1, ATMDR11, PGP19, Ceric.14G054100

Description : subfamily ABCB transporter & original description: pacid=50634466 polypeptide=Ceric.14G054100.1.p locus=Ceric.14G054100 ID=Ceric.14G054100.1.v2.1 annot-version=v2.1


Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.14G054100.1
Cluster HCCA: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
Adi_g103595 ABCB19,... subfamily ABCB transporter & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0039.g026389 PGP11 subfamily ABCB transporter & original description: CDS=323-4378 0.02 OrthoFinder output from all 47 species
Azfi_s2496.g111845 ABCB19,... subfamily ABCB transporter & original description: CDS=142-3066 0.02 OrthoFinder output from all 47 species
Cba_g38324 ABCB19,... subfamily ABCB transporter & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g59935 ABCB19,... subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g03829 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g10485 ABCB14, ATABCB14, PGP14 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g38328 ATPGP4, PGP4, ABCB4, MDR4 not classified & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os08g45030.1 PGP1, ABCB1,... subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Len_g39844 PGP11 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
MA_18863g0010 PGP11 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Mp1g26440.1 No alias subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Nbi_g07933 ABCB19,... subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g18841 PGP11 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014489 PGP6 subfamily ABCB transporter & original description: CDS=1-4245 0.03 OrthoFinder output from all 47 species
Zm00001e017444_P002 PGP21, Zm00001e017444 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 715 987
IPR011527 ABC1_TM_dom 66 338
IPR003439 ABC_transporter-like_ATP-bd 408 556
IPR003439 ABC_transporter-like_ATP-bd 1055 1203
No external refs found!