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  5. Ceric.16G017600.1

Ceric.16G017600.1 (YCF5, Ceric.16G017600)


Aliases : YCF5, Ceric.16G017600

Description : assembly factor CcsA of CCS cytochrome f/c6 maturation system (system II) & original description: pacid=50588895 polypeptide=Ceric.16G017600.1.p locus=Ceric.16G017600 ID=Ceric.16G017600.1.v2.1 annot-version=v2.1


Gene families : OG0008998 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008998_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.16G017600.1

Target Alias Description ECC score Gene Family Method Actions
ATCG01040 YCF5 Cytochrome C assembly protein 0.03 OrthoFinder output from all 47 species
Aev_g47212 YCF5 assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.04 OrthoFinder output from all 47 species
Ceric.18G053700.1 YCF5, Ceric.18G053700 assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.04 OrthoFinder output from all 47 species
Solyc00g500194.1.1 YCF5, Solyc00g500194 Cytochrome c biogenesis protein CcsA OS=Solanum... 0.05 OrthoFinder output from all 47 species
Solyc08g022180.1.1 YCF5, Solyc08g022180 assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0017004 cytochrome complex assembly IEA Interproscan
MF GO:0020037 heme binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR002541 Cyt_c_assembly 68 312
No external refs found!