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  5. Ceric.16G018100.1

Ceric.16G018100.1 (PETA, Ceric.16G018100)


Aliases : PETA, Ceric.16G018100

Description : apocytochrome f component *(PetA) of cytochrome b6/f complex & original description: pacid=50589158 polypeptide=Ceric.16G018100.1.p locus=Ceric.16G018100 ID=Ceric.16G018100.1.v2.1 annot-version=v2.1


Gene families : OG0007601 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007601_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.16G018100.1
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00334p00011840 PETA,... Photosynthesis.photophosphorylation.cytochrome b6/f... 0.04 OrthoFinder output from all 47 species
ATCG00540 PETA photosynthetic electron transfer A 0.17 OrthoFinder output from all 47 species
Aev_g01305 PETA apocytochrome f component *(PetA) of cytochrome b6/f... 0.23 OrthoFinder output from all 47 species
Als_g00738 PETA apocytochrome f component *(PetA) of cytochrome b6/f... 0.11 OrthoFinder output from all 47 species
Aob_g01376 PETA apocytochrome f component *(PetA) of cytochrome b6/f... 0.06 OrthoFinder output from all 47 species
Ceric.05G050200.1 PETA, Ceric.05G050200 not classified & original description: pacid=50577900... 0.18 OrthoFinder output from all 47 species
Ceric.05G050300.1 PETA, Ceric.05G050300 apocytochrome f component *(PetA) of cytochrome b6/f... 0.12 OrthoFinder output from all 47 species
Ceric.38G007000.1 PETA, Ceric.38G007000 apocytochrome f component *(PetA) of cytochrome b6/f... 0.12 OrthoFinder output from all 47 species
Dcu_g21017 PETA apocytochrome f component *(PetA) of cytochrome b6/f... 0.08 OrthoFinder output from all 47 species
GSVIVT01015185001 PETA Cytochrome f OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
Gb_37933 PETA Cytochrome f OS=Cycas taitungensis (sp|a6h5j1|cyf_cycta : 137.0) 0.05 OrthoFinder output from all 47 species
Gb_41662 PETA Cytochrome f OS=Cycas taitungensis (sp|a6h5j1|cyf_cycta : 175.0) 0.05 OrthoFinder output from all 47 species
LOC_Os01g65902.1 PETA, LOC_Os01g65902 apocytochrome f component PetA of cytochrome b6/f complex 0.19 OrthoFinder output from all 47 species
LOC_Os02g24596.1 PETA, LOC_Os02g24596 apocytochrome f component PetA of cytochrome b6/f complex 0.05 OrthoFinder output from all 47 species
LOC_Os06g39738.1 PETA, LOC_Os06g39738 apocytochrome f component PetA of cytochrome b6/f complex 0.05 OrthoFinder output from all 47 species
LOC_Os10g21290.1 PETA, LOC_Os10g21290 apocytochrome f component PetA of cytochrome b6/f complex 0.03 OrthoFinder output from all 47 species
Lfl_g06925 PETA apocytochrome f component *(PetA) of cytochrome b6/f... 0.18 OrthoFinder output from all 47 species
Mp1g27760.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Nbi_g09593 PETA apocytochrome f component *(PetA) of cytochrome b6/f... 0.13 OrthoFinder output from all 47 species
Ore_g43249 PETA apocytochrome f component *(PetA) of cytochrome b6/f... 0.1 OrthoFinder output from all 47 species
Sam_g03361 No alias apocytochrome f component *(PetA) of cytochrome b6/f... 0.07 OrthoFinder output from all 47 species
Smo236857 PETA Photosynthesis.photophosphorylation.cytochrome b6/f... 0.1 OrthoFinder output from all 47 species
Solyc00g500020.1.1 PETA, Solyc00g500020 apocytochrome f component PetA of cytochrome b6/f complex 0.13 OrthoFinder output from all 47 species
Solyc00g500067.1.1 PETA, Solyc00g500067 apocytochrome f component PetA of cytochrome b6/f complex 0.13 OrthoFinder output from all 47 species
Solyc10g045220.1.1 PETA, Solyc10g045220 apocytochrome f component PetA of cytochrome b6/f complex 0.13 OrthoFinder output from all 47 species
Zm00001e042161_P001 PETA, Zm00001e042161 apocytochrome f component PetA of cytochrome b6/f complex 0.06 OrthoFinder output from all 47 species
Zm00001e042498_P001 PETA, Zm00001e042498 Cytochrome f OS=Zea mays (sp|p46617|cyf_maize : 342.0) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA Interproscan
MF GO:0009055 electron transfer activity IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
MF GO:0020037 heme binding IEA Interproscan
CC GO:0042651 thylakoid membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR024094 Cyt_f_lg_dom 84 172
IPR024094 Cyt_f_lg_dom 36 82
IPR002325 Cyt_f 184 302
No external refs found!