Ceric.16G022800.1 (AtRABA1f, RABA1f,...)

Aliases : AtRABA1f, RABA1f, Ceric.16G022800

Description : A-class RAB GTPase & original description: pacid=50589004 polypeptide=Ceric.16G022800.1.p locus=Ceric.16G022800 ID=Ceric.16G022800.1.v2.1 annot-version=v2.1

Gene families : OG0000247 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000247_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.16G022800.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00108p00135260	AtRABA1f,...	Vesicle trafficking.regulation of membrane tethering and...	0.02	OrthoFinder output from all 47 species
AT1G18200	AtRABA6b, RABA6b	RAB GTPase homolog A6B	0.03	OrthoFinder output from all 47 species
AT1G28550	RABA1i, AtRABA1i	RAB GTPase homolog A1I	0.03	OrthoFinder output from all 47 species
AT2G33870	ArRABA1h	RAB GTPase homolog A1H	0.03	OrthoFinder output from all 47 species
Adi_g077469	ATRABA5C, ARA4,...	A-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g077470	ATRABA5C, ARA4,...	A-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g30591	RABA2b,...	A-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Als_g08480	AtRABA1f, RABA1f	A-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g10560	ATRABA2A,...	A-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g01612	RABA2b,...	A-class RAB GTPase & original description: none	0.06	OrthoFinder output from all 47 species
Aop_g42193	AtRABA1f, RABA1f	A-class RAB GTPase & original description: none	0.05	OrthoFinder output from all 47 species
Cba_g00782	AtRABA5d, RABA5d	A-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g11161	ATRABA2A,...	A-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020961.97	AtRABA1e, RABA1e	Vesicle trafficking.regulation of membrane tethering and...	0.01	OrthoFinder output from all 47 species
Cre03.g189250	ATRABA2A,...	Vesicle trafficking.regulation of membrane tethering and...	0.01	OrthoFinder output from all 47 species
Dac_g01462	ATRABA2A,...	A-class RAB GTPase & original description: none	0.05	OrthoFinder output from all 47 species
Dcu_g08021	AtRABA1f, RABA1f	A-class RAB GTPase & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g40522	ATRABA2A,...	A-class RAB GTPase & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g00471	ATRABA5C, ARA4,...	A-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01023225001	ATRABA2A,...	Vesicle trafficking.regulation of membrane tethering and...	0.03	OrthoFinder output from all 47 species
LOC_Os05g01480.1	ATRABA2A,...	A-class RAB GTPase	0.03	OrthoFinder output from all 47 species
Len_g03672	AtRABA1f, RABA1f	A-class RAB GTPase & original description: none	0.04	OrthoFinder output from all 47 species
Len_g16053	ATRABA5C, ARA4,...	A-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g20309	AtRABA1f, RABA1f	A-class RAB GTPase & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009470	ATRABA2A,...	A-class RAB GTPase & original description: CDS=131-796	0.03	OrthoFinder output from all 47 species
Smo146310	AtRABA1f, RABA1f	Vesicle trafficking.regulation of membrane tethering and...	0.03	OrthoFinder output from all 47 species
Solyc02g072180.3.1	ATHSGBP, RABA1d,...	A-class RAB GTPase	0.03	OrthoFinder output from all 47 species
Solyc03g006270.3.1	AtRABA1f,...	A-class RAB GTPase	0.03	OrthoFinder output from all 47 species
Solyc09g098170.4.1	AtRABA5d,...	A-class RAB GTPase	0.03	OrthoFinder output from all 47 species
Spa_g16289	ATRABA2A,...	A-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e003625_P001	ATRABA5C, ARA4,...	A-class RAB GTPase	0.02	OrthoFinder output from all 47 species
Zm00001e030680_P001	ATHSGBP, RABA1d,...	A-class RAB GTPase	0.03	OrthoFinder output from all 47 species
Zm00001e032148_P001	ATRABA1B, RAB11,...	A-class RAB GTPase	0.03	OrthoFinder output from all 47 species
Zm00001e033825_P001	AtRABA1f,...	A-class RAB GTPase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004616	phosphogluconate dehydrogenase (decarboxylating) activity	IEP	HCCA
MF	GO:0004843	cysteine-type deubiquitinase activity	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006098	pentose-phosphate shunt	IEP	HCCA
BP	GO:0006739	NADP metabolic process	IEP	HCCA
BP	GO:0006740	NADPH regeneration	IEP	HCCA
MF	GO:0008121	ubiquinol-cytochrome-c reductase activity	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
MF	GO:0015078	proton transmembrane transporter activity	IEP	HCCA
MF	GO:0015453	oxidoreduction-driven active transmembrane transporter activity	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
BP	GO:0016579	protein deubiquitination	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors	IEP	HCCA
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	HCCA
MF	GO:0019783	ubiquitin-like protein peptidase activity	IEP	HCCA
MF	GO:0022853	active monoatomic ion transmembrane transporter activity	IEP	HCCA
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	HCCA
MF	GO:0050661	NADP binding	IEP	HCCA
BP	GO:0051156	glucose 6-phosphate metabolic process	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA
BP	GO:0070646	protein modification by small protein removal	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	HCCA
MF	GO:0101005	deubiquitinase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	14	174

External Links

No external refs found!

Ceric.16G022800.1 (AtRABA1f, RABA1f,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation