Ceric.16G037600.1 (OVA4, Ceric.16G037600)

Aliases : OVA4, Ceric.16G037600

Description : organellar tryptophan-tRNA ligase & original description: pacid=50589928 polypeptide=Ceric.16G037600.1.p locus=Ceric.16G037600 ID=Ceric.16G037600.1.v2.1 annot-version=v2.1

Gene families : OG0006953 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006953_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.16G037600.1

Target	Alias	Description	ECC score	Gene Family Method
AT2G25840	OVA4	Nucleotidylyl transferase superfamily protein	0.05	OrthoFinder output from all 47 species
Adi_g049439	OVA4	organellar tryptophan-tRNA ligase & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g09607	OVA4	organellar tryptophan-tRNA ligase & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene04169.t1	OVA4, Aspi01Gene04169	organellar tryptophan-tRNA ligase & original description: none	0.05	OrthoFinder output from all 47 species
Azfi_s0029.g024201	OVA4	organellar tryptophan-tRNA ligase & original...	0.04	OrthoFinder output from all 47 species
Cba_g32976	OVA4	organellar tryptophan-tRNA ligase & original description: none	0.03	OrthoFinder output from all 47 species
Cre05.g238322	OVA4	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.05	OrthoFinder output from all 47 species
Dde_g12437	OVA4	organellar tryptophan-tRNA ligase & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g10255	OVA4	organellar tryptophan-tRNA ligase & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os01g54020.1	OVA4, LOC_Os01g54020	tryptophan-tRNA ligase	0.03	OrthoFinder output from all 47 species
Len_g30338	OVA4	organellar tryptophan-tRNA ligase & original description: none	0.04	OrthoFinder output from all 47 species
Mp2g18820.1	OVA4	tryptophan-tRNA ligase	0.06	OrthoFinder output from all 47 species
Ore_g25968	OVA4	organellar tryptophan-tRNA ligase & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g11182	OVA4	organellar tryptophan-tRNA ligase & original description: none	0.06	OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003476	OVA4	organellar tryptophan-tRNA ligase & original...	0.06	OrthoFinder output from all 47 species
Solyc12g095850.2.1	OVA4, Solyc12g095850	tryptophan-tRNA ligase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006418	tRNA aminoacylation for protein translation	IEA	Interproscan
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0043038	amino acid activation	None	Extended
BP	GO:0043039	tRNA aminoacylation	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140101	catalytic activity, acting on a tRNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0006720	isoprenoid metabolic process	IEP	HCCA
BP	GO:0006721	terpenoid metabolic process	IEP	HCCA
BP	GO:0008299	isoprenoid biosynthetic process	IEP	HCCA
BP	GO:0008610	lipid biosynthetic process	IEP	HCCA
MF	GO:0008685	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity	IEP	HCCA
BP	GO:0016114	terpenoid biosynthetic process	IEP	HCCA
MF	GO:0016849	phosphorus-oxygen lyase activity	IEP	HCCA
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	HCCA
MF	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002305	aa-tRNA-synth_Ic	1	88

External Links

No external refs found!

Ceric.16G037600.1 (OVA4, Ceric.16G037600)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation