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  5. Ceric.16G060200.1

Ceric.16G060200.1 (YCF4, Ceric.16G060200)


Aliases : YCF4, Ceric.16G060200

Description : protein involved in PS-I assembly *(YCF4) & original description: pacid=50589932 polypeptide=Ceric.16G060200.1.p locus=Ceric.16G060200 ID=Ceric.16G060200.1.v2.1 annot-version=v2.1


Gene families : OG0009318 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009318_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.16G060200.1
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
ATCG00520 YCF4 unfolded protein binding 0.04 OrthoFinder output from all 47 species
Aev_g15963 YCF4 protein involved in PS-I assembly *(YCF4) & original... 0.05 OrthoFinder output from all 47 species
Aob_g29003 YCF4 protein involved in PS-I assembly *(YCF4) & original... 0.03 OrthoFinder output from all 47 species
Ceric.1Z142100.1 YCF4, Ceric.1Z142100 protein involved in PS-I assembly *(YCF4) & original... 0.04 OrthoFinder output from all 47 species
LOC_Os02g24604.1 YCF4, LOC_Os02g24604 YCF4 protein involved in PS-I assembly 0.05 OrthoFinder output from all 47 species
LOC_Os06g39744.1 YCF4, LOC_Os06g39744 YCF4 protein involved in PS-I assembly 0.05 OrthoFinder output from all 47 species
Solyc00g500019.1.1 YCF4, Solyc00g500019 Photosystem I assembly protein Ycf4 OS=Solanum tuberosum... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009522 photosystem I IEA Interproscan
CC GO:0009579 thylakoid IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008146 sulfotransferase activity IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
InterPro domains Description Start Stop
IPR003359 PSI_Ycf4_assembly 8 172
No external refs found!