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  5. Ceric.17G027800.1

Ceric.17G027800.1 (EST3, MRP4, ATMRP4,...)


Aliases : EST3, MRP4, ATMRP4, ABCC4, Ceric.17G027800

Description : subfamily ABCC transporter & original description: pacid=50617231 polypeptide=Ceric.17G027800.1.p locus=Ceric.17G027800 ID=Ceric.17G027800.1.v2.1 annot-version=v2.1


Gene families : OG0000037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.17G027800.1
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Aev_g21167 ATMRP12, MRP12, ABCC11 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33513 MRP10, ATMRP10, ABCC14 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09219 MRP10, ATMRP10, ABCC14 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29615 MRP6, ATMRP6, ABCC8 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07486 MRP10, ATMRP10, ABCC14 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g17215 EST3, MRP4, ATMRP4, ABCC4 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g12997 EST3, MRP4, ATMRP4, ABCC4 subfamily ABCC transporter & original description: none 0.04 OrthoFinder output from all 47 species
Smo417772 MRP15, ABCC15, ATMRP15 ABC transporter C family member 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc11g065720.2.1 ATMRP14, ABCC10,... subfamily ABCC transporter 0.02 OrthoFinder output from all 47 species
Spa_g13670 MRP6, ATMRP6, ABCC8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20006 EST3, MRP4, ATMRP4, ABCC4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45071 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001897 cytolysis by symbiont of host cells IEP HCCA
BP GO:0001907 killing by symbiont of host cells IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0044403 biological process involved in symbiotic interaction IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
BP GO:0051701 biological process involved in interaction with host IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
MF GO:0090729 toxin activity IEP HCCA
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 322 589
IPR011527 ABC1_TM_dom 989 1211
IPR003439 ABC_transporter-like_ATP-bd 1292 1440
IPR003439 ABC_transporter-like_ATP-bd 653 785
No external refs found!