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  5. Ceric.17G040000.1

Ceric.17G040000.1 (EXP15, ATEXPA15,...)


Aliases : EXP15, ATEXPA15, ATHEXP ALPHA 1.3, ATEXP15, EXPA15, Ceric.17G040000

Description : alpha-class expansin & original description: pacid=50617233 polypeptide=Ceric.17G040000.1.p locus=Ceric.17G040000 ID=Ceric.17G040000.1.v2.1 annot-version=v2.1


Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.17G040000.1

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01019889001 ATEXP7, EXPA7,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 OrthoFinder output from all 47 species
Len_g47676 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Mp3g03890.1 ATEXPA1, EXP1,... alpha-class expansin 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 51 139
IPR007117 Expansin_CBD 152 227
No external refs found!