Aliases : Ceric.17G076500
Description : not classified & original description: pacid=50617139 polypeptide=Ceric.17G076500.1.p locus=Ceric.17G076500 ID=Ceric.17G076500.1.v2.1 annot-version=v2.1
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ceric.17G076500.1 | |
| Cluster | HCCA: Cluster_23 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00065p00033910 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g49740... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G16480 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT1G74600 | No alias | pentatricopeptide (PPR) repeat-containing protein | 0.02 | OrthoFinder output from all 47 species | |
| AT4G16470 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g001575 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g034338 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g108175 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g10918 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g12662 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g17264 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g24621 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g24711 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g30892 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g36192 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g36521 | CRR22 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g36539 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05667 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g06880 | CRR2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g19184 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g29156 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g09042 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g29475 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene07080.t1 | Aspi01Gene07080 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0016.g014262 | No alias | not classified & original description: CDS=1-4500 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0040.g026628 | No alias | not classified & original description: CDS=1-2499 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0229.g059121 | CRR22 | not classified & original description: CDS=1-2070 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0544.g076393 | No alias | not classified & original description: CDS=1-927 | 0.06 | OrthoFinder output from all 47 species | |
| Azfi_s1010.g095171 | No alias | not classified & original description: CDS=1-2025 | 0.06 | OrthoFinder output from all 47 species | |
| Cba_g20531 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000851.30 | No alias | Pentatricopeptide repeat-containing protein At5g61990,... | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g09563 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g21341 | No alias | not classified & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Dcu_g44643 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g06009 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01003650001 | OTP80 | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g10800.1 | DOT4, LOC_Os01g10800 | Pentatricopeptide repeat-containing protein DOT4,... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g49930.1 | LOC_Os03g49930 | Pentatricopeptide repeat-containing protein At1g19720... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g51350.1 | LOC_Os04g51350 | RNA editing factor (AEF1) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g50950.1 | LOC_Os05g50950 | Pentatricopeptide repeat-containing protein At4g01030,... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g08875 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g18067 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g18557 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g21866 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g12162 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g25414 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g36039 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g06586 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g11031 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g13501 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g15565 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g31776 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g08807 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g41140 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g12503 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g13456 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g19619 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g57706 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g18475 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ppi_g29308 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g59278 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0060.g015229 | VAC1, ECB2, ATECB2 | not classified & original description: CDS=1-1704 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g11177 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g12231 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g13547 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g17157 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g17518 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g24764 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g29372 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g46501 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g04723 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g21545 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g56152 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g57155 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003725 | double-stranded RNA binding | IEP | HCCA |
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
| MF | GO:0016791 | phosphatase activity | IEP | HCCA |
| MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| No external refs found! |
