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  5. Ceric.18G020900.1

Ceric.18G020900.1 (ATSS3, SS3, Ceric.18G020900)


Aliases : ATSS3, SS3, Ceric.18G020900

Description : starch synthase *(SS3) & original description: pacid=50622487 polypeptide=Ceric.18G020900.1.p locus=Ceric.18G020900 ID=Ceric.18G020900.1.v2.1 annot-version=v2.1


Gene families : OG0000693 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000693_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.18G020900.1
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00214840 ATSS4, SS4,... Probable starch synthase 4, chloroplastic/amyloplastic... 0.05 OrthoFinder output from all 47 species
AT4G18240 ATSS4, SS4, SSIV starch synthase 4 0.05 OrthoFinder output from all 47 species
Aev_g05532 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g25563 ATSS4, SS4, SSIV not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g13690 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05131 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g02255 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g05284 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0003.g007652 ATSS3, SS3 starch synthase *(SS3) & original description: CDS=201-2645 0.05 OrthoFinder output from all 47 species
Cba_g33306 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.05 OrthoFinder output from all 47 species
Cre06.g282000 ATSS3, SS3 Carbohydrate metabolism.starch... 0.03 OrthoFinder output from all 47 species
Dac_g10971 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g45424 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g01991 ATSS4, SS4, SSIV starch synthase *(SS5) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08981 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50824 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g20658 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os04g53310.1 ATSS3, SS3,... starch synthase (SSIII) 0.03 OrthoFinder output from all 47 species
Len_g01308 ATSS4, SS4, SSIV not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g30585 ATSS4, SS4, SSIV starch synthase *(SS5) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g49747 ATSS4, SS4, SSIV starch synthase *(SS5) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g04240 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.04 OrthoFinder output from all 47 species
Mp1g14910.1 ATSS4, SS4, SSIV starch synthase (SSIV) 0.04 OrthoFinder output from all 47 species
Mp2g08030.1 ATSS4, SS4, SSIV Probable starch synthase 4, chloroplastic/amyloplastic... 0.06 OrthoFinder output from all 47 species
Mp2g20000.1 ATSS3, SS3 starch synthase (SSIII) 0.02 OrthoFinder output from all 47 species
Msp_g26184 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g34784 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02313 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15347 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g07616 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g39876 ATSS4, SS4, SSIV starch synthase *(SS5) & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g43473 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005824 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: CDS=149-3475 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0224.g026292 ATSS4, SS4, SSIV not classified & original description: CDS=1-2052 0.03 OrthoFinder output from all 47 species
Smo154776 ATSS3, SS3 Carbohydrate metabolism.starch... 0.05 OrthoFinder output from all 47 species
Solyc02g080570.3.1 ATSS3, SS3,... starch synthase (SSIII) 0.05 OrthoFinder output from all 47 species
Spa_g10367 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g17570 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e027473_P001 ATSS4, SS4,... starch synthase (SSIV) 0.12 OrthoFinder output from all 47 species
Zm00001e041682_P002 ATSS3, SS3,... starch synthase (SSIII) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:2001070 starch binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0009975 cyclase activity IEP HCCA
MF GO:0009976 tocopherol cyclase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
BP GO:0017038 protein import IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR005085 CBM25 251 332
IPR005085 CBM25 588 674
IPR005085 CBM25 426 512
IPR013534 Starch_synth_cat_dom 685 847
No external refs found!