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  5. Ehy_g00383

Ehy_g00383 (CLPP6, NCLPP1, NCLPP6)


Aliases : CLPP6, NCLPP1, NCLPP6

Description : proteolytic core component *(ClpP1/3-6) of chloroplast Clp-type protease complex & original description: none


Gene families : OG0006579 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006579_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g00383
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AT1G11750 CLPP6, NCLPP1, NCLPP6 CLP protease proteolytic subunit 6 0.05 OrthoFinder output from all 47 species
Adi_g021569 CLPP6, NCLPP1, NCLPP6 proteolytic core component *(ClpP1/3-6) of chloroplast... 0.03 OrthoFinder output from all 47 species
Adi_g031237 CLPP6, NCLPP1, NCLPP6 proteolytic core component *(ClpP1/3-6) of chloroplast... 0.03 OrthoFinder output from all 47 species
Ala_g37589 CLPP6, NCLPP1, NCLPP6 proteolytic core component *(ClpP1/3-6) of chloroplast... 0.04 OrthoFinder output from all 47 species
Als_g13136 CLPP6, NCLPP1, NCLPP6 proteolytic core component *(ClpP1/3-6) of chloroplast... 0.03 OrthoFinder output from all 47 species
Aob_g11501 CLPP6, NCLPP1, NCLPP6 proteolytic core component *(ClpP1/3-6) of chloroplast... 0.03 OrthoFinder output from all 47 species
Aop_g14482 CLPP6, NCLPP1, NCLPP6 proteolytic core component *(ClpP1/3-6) of chloroplast... 0.03 OrthoFinder output from all 47 species
Cba_g02386 CLPP6, NCLPP1, NCLPP6 proteolytic core component *(ClpP1/3-6) of chloroplast... 0.05 OrthoFinder output from all 47 species
Dac_g04527 CLPP6, NCLPP1, NCLPP6 proteolytic core component *(ClpP1/3-6) of chloroplast... 0.08 OrthoFinder output from all 47 species
Dde_g10453 CLPP6, NCLPP1, NCLPP6 proteolytic core component *(ClpP1/3-6) of chloroplast... 0.03 OrthoFinder output from all 47 species
GSVIVT01031936001 CLPP6, NCLPP1, NCLPP6 Protein degradation.peptidase families.serine-type... 0.04 OrthoFinder output from all 47 species
Gb_39858 CLPP6, NCLPP1, NCLPP6 proteolytic core component ClpP1/3-6 of chloroplast... 0.04 OrthoFinder output from all 47 species
LOC_Os03g29810.1 CLPP6, NCLPP1,... proteolytic core component ClpP1/3-6 of chloroplast... 0.03 OrthoFinder output from all 47 species
Len_g09909 CLPP6, NCLPP1, NCLPP6 proteolytic core component *(ClpP1/3-6) of chloroplast... 0.04 OrthoFinder output from all 47 species
Lfl_g05845 CLPP6, NCLPP1, NCLPP6 proteolytic core component *(ClpP1/3-6) of chloroplast... 0.05 OrthoFinder output from all 47 species
Mp4g17530.1 CLPP6, NCLPP1, NCLPP6 proteolytic core component ClpP1/3-6 of chloroplast... 0.04 OrthoFinder output from all 47 species
Ore_g15241 CLPP6, NCLPP1, NCLPP6 proteolytic core component *(ClpP1/3-6) of chloroplast... 0.02 OrthoFinder output from all 47 species
Ore_g40969 CLPP6, NCLPP1, NCLPP6 proteolytic core component *(ClpP1/3-6) of chloroplast... 0.03 OrthoFinder output from all 47 species
Pir_g16719 CLPP6, NCLPP1, NCLPP6 proteolytic core component *(ClpP1/3-6) of chloroplast... 0.05 OrthoFinder output from all 47 species
Sam_g07340 No alias proteolytic core component *(ClpP1/3-6) of chloroplast... 0.03 OrthoFinder output from all 47 species
Sam_g40789 No alias proteolytic core component *(ClpP1/3-6) of chloroplast... 0.03 OrthoFinder output from all 47 species
Smo90346 CLPP6, NCLPP1, NCLPP6 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
Solyc10g051310.2.1 CLPP6, NCLPP1,... proteolytic core component ClpP1/3-6 of chloroplast... 0.04 OrthoFinder output from all 47 species
Spa_g00289 CLPP6, NCLPP1, NCLPP6 proteolytic core component *(ClpP1/3-6) of chloroplast... 0.03 OrthoFinder output from all 47 species
Tin_g13624 CLPP6, NCLPP1, NCLPP6 proteolytic core component *(ClpP1/3-6) of chloroplast... 0.02 OrthoFinder output from all 47 species
Tin_g31246 CLPP6, NCLPP1, NCLPP6 proteolytic core component *(ClpP1/3-6) of chloroplast... 0.03 OrthoFinder output from all 47 species
Zm00001e016157_P003 CLPP6, NCLPP1,... proteolytic core component ClpP1/3-6 of chloroplast... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004807 triose-phosphate isomerase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR023562 ClpP/TepA 83 256
No external refs found!