Aliases : ATHDA15, HDA15, Ceric.18G066800
Description : class-II histone deacetylase & original description: pacid=50621184 polypeptide=Ceric.18G066800.1.p locus=Ceric.18G066800 ID=Ceric.18G066800.1.v2.1 annot-version=v2.1
Gene families : OG0001559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001559_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aev_g18380 | ATHDA15, HDA15 | class-II histone deacetylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g15038 | ATHDA5, HDA05, HDA5 | class-II histone deacetylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g18820 | ATHDA15, HDA15 | class-II histone deacetylase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g19491 | ATHDA15, HDA15 | class-II histone deacetylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g06980.1 | ATHDA15, HDA15,... | class-II histone deacetylase | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g05654 | ATHDA15, HDA15 | class-II histone deacetylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Mp1g20110.1 | ATHDA15, HDA15 | class-II histone deacetylase | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e032874_P003 | ATHDA15, HDA15,... | class-II histone deacetylase | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0004527 | exonuclease activity | IEP | HCCA |
| MF | GO:0004809 | tRNA (guanine-N2-)-methyltransferase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006260 | DNA replication | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
| MF | GO:0008170 | N-methyltransferase activity | IEP | HCCA |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008175 | tRNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | HCCA |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
| MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| CC | GO:0019867 | outer membrane | IEP | HCCA |
| MF | GO:0034061 | DNA polymerase activity | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR023801 | His_deacetylse_dom | 179 | 467 |
| No external refs found! |
