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  5. Ceric.18G081400.1

Ceric.18G081400.1 (ATML1, Ceric.18G081400)


Aliases : ATML1, Ceric.18G081400

Description : HD-ZIP IV-type transcription factor & original description: pacid=50622238 polypeptide=Ceric.18G081400.1.p locus=Ceric.18G081400 ID=Ceric.18G081400.1.v2.1 annot-version=v2.1


Gene families : OG0000253 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000253_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.18G081400.1
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00094630 EDT1, HDG11,... RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
Cba_g04722 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013073001 HDG5, HB-7 RNA biosynthesis.transcriptional activation.HB... 0.04 OrthoFinder output from all 47 species
Len_g01889 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40594 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Mp7g09710.1 ATML1 transcription factor (HD-ZIP IV) 0.03 OrthoFinder output from all 47 species
Ppi_g17562 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g076370.3.1 HDG5, HB-7,... transcription factor (HD-ZIP IV) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008289 lipid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 114 169
IPR002913 START_lipid-bd_dom 306 523
No external refs found!