Ceric.19G029400.1 (YCF5, Ceric.19G029400)


Aliases : YCF5, Ceric.19G029400

Description : assembly factor CcsA of CCS cytochrome f/c6 maturation system (system II) & original description: pacid=50575883 polypeptide=Ceric.19G029400.1.p locus=Ceric.19G029400 ID=Ceric.19G029400.1.v2.1 annot-version=v2.1


Gene families : OG0008998 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008998_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.19G029400.1

Target Alias Description ECC score Gene Family Method Actions
ATCG01040 YCF5 Cytochrome C assembly protein 0.11 OrthoFinder output from all 47 species
Aev_g47212 YCF5 assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.15 OrthoFinder output from all 47 species
Cba_g78789 YCF5 assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.12 OrthoFinder output from all 47 species
Ceric.05G043800.1 YCF5, Ceric.05G043800 assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.1 OrthoFinder output from all 47 species
Ceric.09G081800.1 YCF5, Ceric.09G081800 assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.04 OrthoFinder output from all 47 species
GSVIVT01004975001 YCF5 Photosynthesis.photophosphorylation.cytochrome b6/f... 0.03 OrthoFinder output from all 47 species
Gb_33050 YCF5 assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.05 OrthoFinder output from all 47 species
LOC_Os06g46434.1 YCF5, LOC_Os06g46434 assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.1 OrthoFinder output from all 47 species
Lfl_g37809 YCF5 assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.05 OrthoFinder output from all 47 species
Solyc00g500194.1.1 YCF5, Solyc00g500194 Cytochrome c biogenesis protein CcsA OS=Solanum... 0.12 OrthoFinder output from all 47 species
Solyc08g022180.1.1 YCF5, Solyc08g022180 assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.11 OrthoFinder output from all 47 species
Solyc11g021210.2.1 YCF5, Solyc11g021210 assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0017004 cytochrome complex assembly IEA Interproscan
MF GO:0020037 heme binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002541 Cyt_c_assembly 68 312
No external refs found!