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  5. Ceric.19G074400.1

Ceric.19G074400.1 (APUM12, PUM12, Ceric.19G074400)


Aliases : APUM12, PUM12, Ceric.19G074400

Description : not classified & original description: pacid=50576469 polypeptide=Ceric.19G074400.1.p locus=Ceric.19G074400 ID=Ceric.19G074400.1.v2.1 annot-version=v2.1


Gene families : OG0000858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000858_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.19G074400.1
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
Adi_g008224 APUM12, PUM12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18965 APUM12, PUM12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17736 APUM12, PUM12 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g38740 PUM7, APUM7 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 388 408
IPR001313 Pumilio_RNA-bd_rpt 701 717
IPR001313 Pumilio_RNA-bd_rpt 777 792
IPR001313 Pumilio_RNA-bd_rpt 516 549
IPR001313 Pumilio_RNA-bd_rpt 593 622
IPR001313 Pumilio_RNA-bd_rpt 552 585
IPR001313 Pumilio_RNA-bd_rpt 735 768
IPR001313 Pumilio_RNA-bd_rpt 628 658
IPR001313 Pumilio_RNA-bd_rpt 663 696
No external refs found!