Ehy_g00744


Description : pre-60S ribosomal subunit assembly factor *(NOP16) & original description: none


Gene families : OG0005949 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005949_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g00744

Target Alias Description ECC score Gene Family Method Actions
Adi_g012865 No alias pre-60S ribosomal subunit assembly factor *(NOP16) &... 0.03 OrthoFinder output from all 47 species
Cba_g00402 No alias pre-60S ribosomal subunit assembly factor *(NOP16) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01027991001 No alias No description available 0.02 OrthoFinder output from all 47 species
Pnu_g16970 No alias pre-60S ribosomal subunit assembly factor *(NOP16) &... 0.03 OrthoFinder output from all 47 species
Solyc09g075030.3.1 Solyc09g075030 pre-60S ribosomal subunit assembly factor (NOP16) 0.02 OrthoFinder output from all 47 species
Zm00001e031413_P001 Zm00001e031413 pre-60S ribosomal subunit assembly factor (NOP16) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP HCCA
BP GO:0000077 DNA damage checkpoint signaling IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0010948 negative regulation of cell cycle process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0031570 DNA integrity checkpoint signaling IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0042770 signal transduction in response to DNA damage IEP HCCA
BP GO:0045786 negative regulation of cell cycle IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
BP GO:1901987 regulation of cell cycle phase transition IEP HCCA
BP GO:1901988 negative regulation of cell cycle phase transition IEP HCCA
InterPro domains Description Start Stop
IPR019002 Ribosome_biogenesis_Nop16 3 75
IPR019002 Ribosome_biogenesis_Nop16 103 173
No external refs found!