Ceric.1Z240400.1 (Ceric.1Z240400)

Aliases : Ceric.1Z240400

Description : aminoacyl-tRNA binding factor *(eEF1A)) & original description: pacid=50636983 polypeptide=Ceric.1Z240400.1.p locus=Ceric.1Z240400 ID=Ceric.1Z240400.1.v2.1 annot-version=v2.1

Gene families : OG0000296 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000296_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.1Z240400.1
Cluster	HCCA: Cluster_110

Target	Alias	Description	ECC score	Gene Family Method
AT1G07930	No alias	GTP binding Elongation factor Tu family protein	0.02	OrthoFinder output from all 47 species
AT5G60390	No alias	GTP binding Elongation factor Tu family protein	0.02	OrthoFinder output from all 47 species
Ala_g31488	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.03	OrthoFinder output from all 47 species
Als_g38226	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g20702	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.03	OrthoFinder output from all 47 species
Azfi_s0002.g001607	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.05	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021352.57	No alias	Protein biosynthesis.translation elongation.eEF1A...	0.02	OrthoFinder output from all 47 species
Mp3g23400.1	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.03	OrthoFinder output from all 47 species
Msp_g29578	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g45064	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.02	OrthoFinder output from all 47 species
Pir_g55227	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g28961	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.03	OrthoFinder output from all 47 species
Sam_g16997	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.02	OrthoFinder output from all 47 species
Sam_g16998	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.03	OrthoFinder output from all 47 species
Sam_g16999	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.03	OrthoFinder output from all 47 species
Sam_g28089	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g29350	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.03	OrthoFinder output from all 47 species
Sam_g49146	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e030598_P002	Zm00001e030598	aminoacyl-tRNA binding factor (eEF1A)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000723	telomere maintenance	IEP	HCCA
MF	GO:0003678	DNA helicase activity	IEP	HCCA
MF	GO:0004386	helicase activity	IEP	HCCA
MF	GO:0004478	methionine adenosyltransferase activity	IEP	HCCA
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0006556	S-adenosylmethionine biosynthetic process	IEP	HCCA
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
CC	GO:0030117	membrane coat	IEP	HCCA
CC	GO:0030120	vesicle coat	IEP	HCCA
CC	GO:0030127	COPII vesicle coat	IEP	HCCA
BP	GO:0032200	telomere organization	IEP	HCCA
BP	GO:0044272	sulfur compound biosynthetic process	IEP	HCCA
BP	GO:0046500	S-adenosylmethionine metabolic process	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000795	T_Tr_GTP-bd_dom	6	221
IPR004161	EFTu-like_2	248	313
IPR004160	Transl_elong_EFTu/EF1A_C	322	429

External Links

No external refs found!

Ceric.1Z240400.1 (Ceric.1Z240400)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation