Aliases : HAF01, HAC13, TAF1, HAF1, GTD1, Ceric.20G008000
Description : component *(HAF/TAF1) of SAGA transcription co-activator complex & original description: pacid=50567261 polypeptide=Ceric.20G008000.1.p locus=Ceric.20G008000 ID=Ceric.20G008000.1.v2.1 annot-version=v2.1
Gene families : OG0003088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003088_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00078p00132750 | HAF01, HAC13,... | Protein modification.phosphorylation.atypical kinase... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G32750 | HAF01, HAC13,... | HAC13 protein (HAC13) | 0.09 | OrthoFinder output from all 47 species | |
| Adi_g086241 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.06 | OrthoFinder output from all 47 species | |
| Aev_g16440 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g25268 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.08 | OrthoFinder output from all 47 species | |
| Als_g23531 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.05 | OrthoFinder output from all 47 species | |
| Als_g30416 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g13570 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.06 | OrthoFinder output from all 47 species | |
| Aspi01Gene49967.t1 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene49969.t1 | TAF1B, TAF1,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene49971.t1 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene63823.t1 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0007.g011150 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g11487 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020903.20 | HAF01, HAC13,... | RNA biosynthesis.RNA polymerase II-dependent... | 0.03 | OrthoFinder output from all 47 species | |
| Cre10.g425501 | HAF01, HAC13,... | Transcription initiation factor TFIID subunit 1 OS=Oryza... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g06992 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g03217 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.11 | OrthoFinder output from all 47 species | |
| GSVIVT01020528001 | HAF01, HAC13,... | Protein modification.phosphorylation.atypical kinase... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_10677 | HAF01, HAC13,... | component HAF/TAF1 of SAGA transcription co-activator... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os06g43790.1 | HAF01, HAC13,... | component HAF/TAF1 of SAGA transcription co-activator... | 0.08 | OrthoFinder output from all 47 species | |
| Lfl_g06767 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10432545g0020 | HAF01, HAC13,... | component HAF/TAF1 of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Mp5g22790.1 | HAF01, HAC13,... | component HAF/TAF1 of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g14379 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.07 | OrthoFinder output from all 47 species | |
| Ore_g04821 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.08 | OrthoFinder output from all 47 species | |
| Pir_g10966 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g32049 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0008.g004278 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g37859 | No alias | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.05 | OrthoFinder output from all 47 species | |
| Smo409957 | HAF01, HAC13,... | Protein modification.phosphorylation.atypical kinase... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc07g006820.4.1 | HAF01, HAC13,... | component HAF/TAF1 of SAGA transcription co-activator... | 0.09 | OrthoFinder output from all 47 species | |
| Spa_g55054 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g11474 | HAF01, HAC13,... | component *(HAF/TAF1) of SAGA transcription co-activator... | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e037464_P001 | HAF01, HAC13,... | component HAF/TAF1 of SAGA transcription co-activator... | 0.07 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0017069 | snRNA binding | IEP | HCCA |
| MF | GO:0017070 | U6 snRNA binding | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
| MF | GO:0030623 | U5 snRNA binding | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0140299 | small molecule sensor activity | IEP | HCCA |
| MF | GO:0140612 | DNA damage sensor activity | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| MF | GO:0140664 | ATP-dependent DNA damage sensor activity | IEP | HCCA |
| No external refs found! |
