Ceric.20G043500.1 (LOP1, TRN1, Ceric.20G043500)


Aliases : LOP1, TRN1, Ceric.20G043500

Description : not classified & original description: pacid=50566189 polypeptide=Ceric.20G043500.1.p locus=Ceric.20G043500 ID=Ceric.20G043500.1.v2.1 annot-version=v2.1


Gene families : OG0000350 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000350_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.20G043500.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00138540 LOP1, TRN1,... Protein TORNADO 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Aev_g29974 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g39267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g19032 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g19733 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14110 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00814 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26355 LOP1, TRN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0049.g030849 No alias not classified & original description: CDS=1-2208 0.07 OrthoFinder output from all 47 species
Cba_g17165 LOP1, TRN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g36996 LOP1, TRN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.18G016100.1 LOP1, TRN1,... not classified & original description: pacid=50621243... 0.04 OrthoFinder output from all 47 species
Ceric.18G016700.1 LOP1, TRN1,... not classified & original description: pacid=50621054... 0.03 OrthoFinder output from all 47 species
Dac_g06916 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g10563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14654 LOP1, TRN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g20580 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g28571 LOP1, TRN1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g28623 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35961 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g40231 LOP1, TRN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g40817 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10111 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g10112 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10113 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g16004 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g26452 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g07406 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g28705 LOP1, TRN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g51318 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_94605g0010 LOP1, TRN1 Protein TORNADO 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_94605g0020 LOP1, TRN1 Protein TORNADO 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g15715 LOP1, TRN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g15716 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24007 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g38222 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g41660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g37529 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g41368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32964 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g42088 LOP1, TRN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g25087 LOP1, TRN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g37194 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39802 LOP1, TRN1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g16496 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20985 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g45781 LOP1, TRN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!