1. Home
  2. Species
  3. Ceratopteris richardii
  4. Sequence
  5. Ceric.20G044000.1

Ceric.20G044000.1 (Ceric.20G044000)


Aliases : Ceric.20G044000

Description : bHLH-type transcription factor & original description: pacid=50566332 polypeptide=Ceric.20G044000.1.p locus=Ceric.20G044000 ID=Ceric.20G044000.1.v2.1 annot-version=v2.1


Gene families : OG0000267 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000267_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.20G044000.1

Target Alias Description ECC score Gene Family Method Actions
AT4G21330 DYT1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Aop_g11432 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11860 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18600 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_36380 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Lfl_g24609 ATBHLH029,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41594 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16653 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g079810.3.1 DYT1, Solyc02g079810 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Spa_g52634 SCRM2, ICE2 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 228 277
No external refs found!