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  5. Ceric.20G056900.1

Ceric.20G056900.1 (Ceric.20G056900)


Aliases : Ceric.20G056900

Description : basal transcription factor *(TFIIb) & original description: pacid=50567642 polypeptide=Ceric.20G056900.1.p locus=Ceric.20G056900 ID=Ceric.20G056900.1.v2.1 annot-version=v2.1


Gene families : OG0001894 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001894_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.20G056900.1

Target Alias Description ECC score Gene Family Method Actions
Ala_g12020 No alias basal transcription factor *(TFIIb) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g00981 No alias basal transcription factor *(TFIIb) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0017025 TBP-class protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR013137 Znf_TFIIB 6 47
IPR013150 TFIIB_cyclin 204 289
IPR013150 TFIIB_cyclin 101 184
No external refs found!