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  5. Ceric.20G071800.1

Ceric.20G071800.1 (ASK1, ATSKP1, UIP1,...)


Aliases : ASK1, ATSKP1, UIP1, SKP1, SKP1A, Ceric.20G071800

Description : ASK-type linker component of SCF E3 ubiquitin ligase complexes & original description: pacid=50566036 polypeptide=Ceric.20G071800.1.p locus=Ceric.20G071800 ID=Ceric.20G071800.1.v2.1 annot-version=v2.1


Gene families : OG0000379 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000379_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.20G071800.1
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
AT4G34470 SK12, ASK12 SKP1-like 12 0.03 OrthoFinder output from all 47 species
Ceric.20G070800.1 ASK1, ATSKP1,... ASK-type linker component of SCF E3 ubiquitin ligase... 0.01 OrthoFinder output from all 47 species
Ceric.20G072100.1 ASK1, ATSKP1,... ASK-type linker component of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Ceric.20G072200.1 ASK2, SKP1B,... ASK-type linker component of SCF E3 ubiquitin ligase... 0.07 OrthoFinder output from all 47 species
GSVIVT01024014001 ASK1, ATSKP1,... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
LOC_Os07g05150.1 ASK2, SKP1B,... target protein binding component SKP1/ASK1 of... 0.03 OrthoFinder output from all 47 species
LOC_Os07g05160.1 ASK4, SK4, LOC_Os07g05160 target protein binding component SKP1/ASK1 of... 0.03 OrthoFinder output from all 47 species
LOC_Os07g05180.1 ASK2, SKP1B,... target protein binding component SKP1/ASK1 of... 0.02 OrthoFinder output from all 47 species
LOC_Os07g43270.1 ASK1, ATSKP1,... target protein binding component SKP1/ASK1 of... 0.05 OrthoFinder output from all 47 species
LOC_Os08g28800.1 ASK1, ATSKP1,... target protein binding component SKP1/ASK1 of... 0.02 OrthoFinder output from all 47 species
LOC_Os08g28820.1 ASK1, ATSKP1,... target protein binding component SKP1/ASK1 of... 0.03 OrthoFinder output from all 47 species
Nbi_g29347 ASK2, SKP1B ASK-type linker component of SCF E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Ppi_g09622 ASK2, SKP1B ASK-type linker component of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR016073 Skp1_comp_POZ 8 65
IPR016072 Skp1_comp_dimer 115 162
No external refs found!